Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq192 104 2e-17 >seq192 Length=879878 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| |||||||| | | |||| ||| | ||| |||||||| | ||||||||| || Sbjct 213462 GCCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGA 213403 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 ||| ||||| | || || | ||| || || ||||| || | ||||||||||| | || Sbjct 213402 CAAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGG 213343 Query 43002 CACACCTTCTTTTTCGCTGATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060 | ||| || || || |||| ||| ||||| || | | ||||| || ||| | Sbjct 213342 GATACCCTCCTTATCCTGGATCTTGCTC-TTGACATTGTCGATGGTGTCTGAAGACTCTA 213284 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | |||| || ||||| ||||| || ||||| || || || |||||||| Sbjct 213283 CTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 213235 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || |||||||| | | ||||| |||| |||||||||||||| | |||||||||||| Sbjct 213689 CCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAG 213630 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | || ||||| || || || || || || | ||||| || || | || Sbjct 213629 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 213570 Query 43003 ACACCTTCTTTTTCGCTGATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | || || || || |||| ||| || || || ||| |||||| | ||| || Sbjct 213569 ATGCCCTCCTTGTCTTGGATCTTGCTC-TTCACGTTGTCAATCGTGTCGGAGGACTCCAC 213511 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || |||||||| ||||| || || || || ||||| Sbjct 213510 CTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 213463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381368633228064