Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq113 217 2e-51 >seq113 Length=654563 Score = 217 bits (240), Expect = 2e-51 Identities = 591/899 (66%), Gaps = 12/899 (1%) Strand=Plus/Plus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 || ||||| || || || ||| | || ||||| |||||| || || | || | | Sbjct 85954 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 86013 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063 || || || | | ||||| ||||| || |||||||| |||| || || || Sbjct 86014 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 86073 Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123 ||||| | || ||| ||||| || || ||||| |||||| |||||| | | Sbjct 86074 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 86133 Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183 ||||| | |||||| || || | ||| || || | | | || || || ||||| |||||| Sbjct 86134 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 86193 Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243 || || | || ||||| ||||| || | || | | ||| |||| |||||| || || Sbjct 86194 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 86253 Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCT 72303 | ||||| || || || ||| || ||||||| || | || || || Sbjct 86254 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 86313 Query 72304 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TATCATAGATGCCCTC 72362 || || || || | || ||||| | || || || |||| | | || ||||| ||||| Sbjct 86314 ATACCGCCAGCTGTCTTCGAGATCATGGCACAA-GTCTTAAGGGTGTCGTAGATACCCTC 86372 Query 72363 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGACTAGT 72419 || ||||| ||| |||| | | || || || |||| | ||| | | ||| Sbjct 86373 AATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGT 86429 Query 72420 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 72479 || ||||| || | ||||||||||| || || || |||| | ||||| || | ||| Sbjct 86430 ACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTA 86489 Query 72480 CGTCTCAATAGCTGATTCTATATCCCATTG--ATGTATTCCTACCGCGACACGCATTAAC 72537 |||||||| || ||| |||| ||| ||| || || ||||| |||||||| ||| Sbjct 86490 GGTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAAC 86547 Query 72538 ATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAA 72597 | ||||| || | ||| | | |||| ||| ||| || || |||||| || | Sbjct 86548 AAGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGT 86607 Query 72598 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGT 72657 || || ||||| ||| ||||||| ||||| || || || | |||| | || ||||| Sbjct 86608 GTCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGC 86667 Query 72658 TTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTC 72717 | ||| || ||| | || || || || | ||||| || || | ||| | Sbjct 86668 TCATCAGCATGTTTCATGACAATTTCATACGTCTCTTTCGAAATCATTGGCGCGGGTTGC 86727 Query 72718 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 72777 ||||| || |||||||||| | | | ||| || || | || | || || Sbjct 86728 TTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCTTG 86787 Query 72778 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 |||| |||||| || || || |||||||| | ||| |||| ||||||||||| || || Sbjct 86788 GTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGTG 86846 Score = 105 bits (116), Expect = 9e-18 Identities = 346/530 (65%), Gaps = 11/530 (2%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 |||||||| ||||||| ||| || || | ||||| || |||||||| || || || | | Sbjct 84748 GTAAACTGGATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATTCCAGTCTTCAAA 84807 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919 || | |||| || ||| |||||||| || || ||| |||| |||| || | Sbjct 84808 CCCATTTTCCACCCAGCAAAGTGCATACTGGTGAGCTTGCCCATAG-TAGGCTCCTTCAG 84866 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 |||||| || | || ||| || || ||||| || || | ||| || ||||| | | Sbjct 84867 GTGAATGTTGAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATCTGCAG 84926 Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039 ||| || ||| | |||||||| | || || || | ||| || || | |||| Sbjct 84927 GATGGTACGTTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTGATGTCGGCGGGAAT 84986 Query 71040 GTTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096 ||| | | || |||| ||| ||||||||||| || || | ||||| || | || Sbjct 84987 GTTGGGAATGTTTTGAACGGAGCCACCATCTGCGATGATACGGTTTTTCATGTTGTCCGA 85046 Query 71097 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCC 71156 ||| | ||| | | | | || || ||| ||||| || || || || || Sbjct 85047 CCACAGACCAAGGTCGACAAGATCCTTGAGAAGCCAAGGGTTAACGACCTGGAACTCACC 85106 Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216 || | || | |||| ||| || || ||| || || || | | || || || Sbjct 85107 AGCAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCAAAACATTCGTTGAAGCC 85166 Query 71217 CAAAATTTGAGCAGTTG-ATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGAC 71275 || ||| || || | || ||| || ||||| ||||||||||| | ||| || | || || Sbjct 85167 CAGAATCTG-GCTGGTGCTTGCGGTGGGCATCGGTGCCACCAACAAACTGTTACGAACAC 85225 Query 71276 CATGTGATCGG--ATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323 | ||| | || || || | || ||||| ||||| | ||| || |||| Sbjct 85226 C--GTGCTGGGCAATCTTCGCCTTCAGAGAATCCCAGTCCCAGAGGTCCG 85273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137455038080