Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13]
208 sequences; 28,240,437 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 5e-28
>seq1
Length=367421
Score = 140 bits (154), Expect = 5e-28
Identities = 572/903 (63%), Gaps = 89/903 (10%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|||||| |||||||||| || || | || ||||| ||||| | ||| ||| | |||||
Sbjct 34744 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 34803
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||| || ||| |||| ||| | | ||| ||| ||| |||||| | || || ||
Sbjct 34804 TCCAAAGATCTGCACGACTGGAACAACCGTCTGAATGACGATGAGCGTTATTTCATCTCT 34863
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
|| | | |||||||| || | ||| || |||||||| || || || ||||| ||
Sbjct 34864 CATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGC 34923
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257
||| | ||| || | || |||| ||| ||||| ||||| ||||| ||||||||
Sbjct 34924 TTCAGCAATGAGGTGCAGGTGCCTGAGGC-TCGATGCTTCTACGGCTTCCAGATCATGAT 34982
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC--- 125314
||||||| | || ||||| | ||||| |||||||| | ||||| || ||
Sbjct 34983 TGAGAACATTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGCCTAA 35042
Query 125315 GCAACGTAAACACATGCTCTTTAACGCAATCGACAC------GGTGCCGTC--------- 125359
||| || | || |||||| ||||||| || || | ||| |||
Sbjct 35043 GCAGCGGACCTAC---CTCTTTGACGCAATTGATACAAGTATGCTGCTGTCTCGTTTCTC 35099
Query 125360 -------------------------------------TATACGTAAAAAGGCTCAATGGG 125382
||| | || ||||| || ||||
Sbjct 35100 TCGTTTAGACCGATCACTAATTTCCTCTAGTTCCTTGTATCAGGAAGAAGGCCCAGTGGG 35159
Query 125383 TGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCG 125442
|| | ||||| ||| | | ||| | | ||| | | || ||||| |||||||
Sbjct 35160 CCATGAGATGGATTTCTGATAAGGAATCTACTTTCGCTCAGCGCCTTGTGGCCTTCGCCG 35219
Query 125443 CCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCG 125502
| || ||||| ||||| || || || |||||| ||||||| ||||| |||||||| |
Sbjct 35220 CTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCTGGCTGAAGAAGCGTG 35279
Query 125503 GACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACT 125562
| | ||||| || || || | |||||| | || ||||| |||||||| || |||
Sbjct 35280 GCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGACTGCACA 35339
Query 125563 GTGACTTTGC---CATTCTACTGTTTCGCAACT--ATCTGCGTCCCGAGTGCAGATCCAG 125617
|||||||| | |||| || |||| || | | | || ||||| ||| ||
Sbjct 35340 CAGACTTTGCTTGCCTTCT-CT-TTTCTCACTTGAACCATCGCCCCGA--CAAGA---AG 35392
Query 125618 CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAAC 125677
| | ||| || | | || || || ||| || ||||| ||||| | ||
Sbjct 35393 -GTTATTGAGGATATTATCGTT------GAGGCTGTGGCCATTGAACAGGAGTTCTTGAC 35445
Query 125678 CGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGA 125737
|| | || || || | | |||||||||| |||||||||||| |||| || ||
Sbjct 35446 AGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTATATTGA 35505
Query 125738 GTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTGGCCGCAAGATTTA---CAACGCC 125792
||| || || ||||| || || |||| |||| ||||| || |||| |
Sbjct 35506 GTTCGTTGCTGATCGGCTGTTG-----GTTGCTCTTGGAAACAAGAAGTACTTCAACTCT 35560
Query 125793 AAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAG 125852
|| ||||| || |||||| || || || || | || ||||| ||||| || |||
Sbjct 35561 CCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGAG 35620
Query 125853 AAG 125855
|||
Sbjct 35621 AAG 35623
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057273246080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |