Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13]
208 sequences; 28,240,437 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq113 239 6e-58
>seq113
Length=654563
Score = 239 bits (264), Expect = 6e-58
Identities = 596/899 (66%), Gaps = 12/899 (1%)
Strand=Plus/Plus
Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197
|| ||||| || || |||||| |||| ||||| ||||| || || | || | |
Sbjct 85954 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 86013
Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257
|| || |||| || ||||| ||||| || |||||||| |||| || || ||
Sbjct 86014 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 86073
Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317
||||| | || ||| |||||| || || ||||| |||||| |||||| | |
Sbjct 86074 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 86133
Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377
||||| | |||||| || || | ||| || || | | | ||||| || ||||| ||||||
Sbjct 86134 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 86193
Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437
|| || | || ||||| ||||| || | || | | ||| |||| ||||||||| ||
Sbjct 86194 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 86253
Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63497
||||| || || || ||| || ||||||| || || || ||
Sbjct 86254 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 86313
Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TGTCATAGATACCCTC 63556
|| || || || | || ||||| | || || || |||| | |||| |||||||||||
Sbjct 86314 ATACCGCCAGCTGTCTTCGAGATCATGGCACAA-GTCTTAAGGGTGTCGTAGATACCCTC 86372
Query 63557 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGACTAGT 63613
|||||||| || |||| | | || || || |||| | ||| | | |||
Sbjct 86373 AATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGT 86429
Query 63614 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63673
|| ||||| || | ||||||||||| || || || |||| | ||| | || | |||
Sbjct 86430 ACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTA 86489
Query 63674 CGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 63731
|||||||| || || |||| ||| |||||| || || || |||||||| |||
Sbjct 86490 GGTCTCAATGGCCTTTTCAATATTG--TTGCCATGAATGCCAACCGCAACACGCATCAAC 86547
Query 63732 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63791
| |||||| || | ||| | | |||| || ||| || || |||||| || |
Sbjct 86548 AAGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGT 86607
Query 63792 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 63851
|| || ||||| ||| ||||||| ||||| || || || | |||| | ||||||||
Sbjct 86608 GTCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGC 86667
Query 63852 TTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTC 63911
| ||| || ||| | || || || || | ||||| || || | ||| |
Sbjct 86668 TCATCAGCATGTTTCATGACAATTTCATACGTCTCTTTCGAAATCATTGGCGCGGGTTGC 86727
Query 63912 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 63971
||||| || |||||||||| | | | ||| || || | || | || ||
Sbjct 86728 TTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCTTG 86787
Query 63972 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030
|||| |||||| || || || |||||||| | ||| |||| ||||||||||| || ||
Sbjct 86788 GTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGTG 86846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622945580337280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |