Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13]
208 sequences; 28,240,437 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 1e-23
seq201 100 6e-16
>seq1
Length=367421
Score = 125 bits (138), Expect = 1e-23
Identities = 298/440 (68%), Gaps = 24/440 (5%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|| ||||| || | ||| || | || ||||| |||||||||||||||||||| |
Sbjct 35619 TCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTTTCCATGAAGTCGAAGGGGTTGGGA 35560
Query 251623 GCATTG---TACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679
| ||| |||| |||| | ||||| || || || | || || || || |||||
Sbjct 35559 GAGTTGAAGTACTTCTTG---TTTCCAAGAGCAACCAACAGCCGATCAGCAACGAACTCA 35503
Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739
| |||||| | ||| || | |||||||||||| | | | | ||||| || ||
Sbjct 35502 ATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGAGCAACAGGAAGAGCGTCTGTC 35443
Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCA 251794
| ||| |||| ||| |||| || ||||| | | ||| ||| | |||| || |
Sbjct 35442 AAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATATCCTCAATAACCTTCTTGTCG 35383
Query 251795 GAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGC---CAAACTGTTGGTGCAGAC 251851
| | | || | || || |||| | || || || |||| | | |||||| |
Sbjct 35382 GGGCGA---TGGT-TCAAG---TGAGAAAAG-AGAAGGCAAGCAAAGTCTGTGTGCAGTC 35331
Query 251852 CCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCC 251911
||||||| ||| ||||| ||||||||| | | || |||||||||| ||||| |||
Sbjct 35330 CCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAAGCCACGCTTCT 35271
Query 251912 TGAGCCAGAAGATTGC-GCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCAT 251970
| ||||||||||| | ||||||| |||||||||| | | ||||| ||| | |
Sbjct 35270 TCAGCCAGAAGATGGAAGCAAAAG-ATCCAGAGAAAAAGATTCCCTCCACAGCGGCGAAG 35212
Query 251971 GCAACAAGGCGCTCAGCAAA 251990
|| |||||||||| ||| ||
Sbjct 35211 GCCACAAGGCGCTGAGCGAA 35192
>seq201
Length=604755
Score = 100 bits (110), Expect = 6e-16
Identities = 172/244 (70%), Gaps = 12/244 (5%)
Strand=Plus/Plus
Query 280649 CAAGAATGTTGAGGACCA-TATGACCAAGCTGGGTCTGGACCCCGA----GTTTACAACT 280703
|||| | |||||| ||| | || |||| | ||||| || |||| |||| ||
Sbjct 280029 CAAGGAGATTGAGGCCCACTGTG-CCAACTTCGGTCTCGATGCCGAACTCGTTT----CT 280083
Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762
|||||||| || |||||||| || || || ||| ||||| | ||| ||| || ||
Sbjct 280084 CACTCTCGTATGCGCGGTCTGTCCGGTGGTCAGCGTGTCAAGGTCGTCCTCGCCGCCTGC 280143
Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|| |||||| | |||||||| ||||| ||||||||||| ||||||||||| ||||| ||
Sbjct 280144 TC-GTGGCAGCGTCCTCACGTCATCGTCCTCGACGAGCCCACCAACTATCTCGACCGTGA 280202
Query 280823 GAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCATTTC 280882
||||| || ||| ||||| | || || | || || ||||| ||||| |
Sbjct 280203 CTCTCTGGGTGCCCTGTCCAAGGCTCTCAAGACTTTCGAGGGTGGTGTCGTTATCATTAC 280262
Query 280883 TCAC 280886
|||
Sbjct 280263 CCAC 280266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834060814928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |