Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13]
208 sequences; 28,240,437 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq113 141 2e-28
seq1 131 3e-25
>seq113
Length=654563
Score = 141 bits (156), Expect = 2e-28
Identities = 325/479 (68%), Gaps = 18/479 (4%)
Strand=Plus/Plus
Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029
||||| | ||| |||| || ||| | || || | || |||||| || || ||| ||
Sbjct 85999 GGGCAGAACAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTC 86058
Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC--TCGTCCGAGCCAGTGTTCTTCCTCA 245087
|| ||||| | ||| || || | || ||||| || ||| || |||||| | |
Sbjct 86059 CACAGGGCGTAGAACAGATCACGGG--CTCTGACTTCCTCCTTACCGTGGTTCTTGCGAA 86116
Query 245088 GCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGG 245147
| |||| || || |||| ||| | ||||| ||||| | ||| | ||| | ||||| |
Sbjct 86117 GATCCAGGAACTCGAAGATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAG 86176
Query 245148 GCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTA 245206
| |||||||| ||||||||||| || ||| | || | |||||| | ||| || |
Sbjct 86177 GGCGCTTGTTACCTCCCTGGTCGACATACCTAGC-AGTGTTGTTGAACACGCGAAGCATG 86235
Query 245207 GGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGG 245266
|| || || ||||||||| || || ||||| ||||||| ||| || | | ||
Sbjct 86236 GGAACAATACCGTTAGAGGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCAC---GG 86292
Query 245267 TTGCTGATGGAC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322
||| | || || | ||| | ||||| || ||| ||||| | ||| || ||||
Sbjct 86293 ATGC-GGTGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTT 86351
Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382
| |||||| || ||||| ||||| ||| |||||| | || || ||||| || |
Sbjct 86352 AAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGC 86411
Query 245383 CAGCTGGGGCTTGGGGCTGCACGAG--TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439
|||||||| |||||| | || || ||||||||||| || || || || |||||
Sbjct 86412 AAGCTGGGG-TTGGGG-AGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTA 86468
>seq1
Length=367421
Score = 131 bits (144), Expect = 3e-25
Identities = 296/442 (67%), Gaps = 5/442 (1%)
Strand=Plus/Plus
Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764
|| || ||||| |||| || ||||| ||||| ||||| || | || || |||||||||
Sbjct 35204 CTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTC 35263
Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824
||||| ||| || | | |||||| || ||||| ||||| ||||| |||||| |
Sbjct 35264 TGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGT 35323
Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884
|||||||| ||||| | |||||||| ||||| || || || ||| | | ||
Sbjct 35324 GACGAGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTTC---TCACTTGAACCATCGC 35380
Query 42885 CCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944
||| ||| || | || || ||| ||||| |||| || || ||||||||
Sbjct 35381 CCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTGAACAGGAGTTC 35440
Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004
| || | | || || || | || | ||||||||| | || |||||| ||||
Sbjct 35441 TTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTAT 35500
Query 43005 ATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACAC 43063
|| ||| ||| || || | || | || | ||| || | || |||| |
Sbjct 35501 ATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAG-TACTTCAACTC 35559
Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123
|| |||||||||||| ||||| | |||||| | | || ||||| ||||| || ||
Sbjct 35560 TCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGA 35619
Query 43124 GAAGCGCGTCGCCGACTACCAG 43145
|||||| || | |||||||||
Sbjct 35620 GAAGCGTGTTGGTGACTACCAG 35641
Score = 113 bits (124), Expect = 9e-20
Identities = 202/289 (70%), Gaps = 7/289 (2%)
Strand=Plus/Plus
Query 42309 ATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA 42367
||||||||||| || | || | ||| ||||||||||||||||||||| || |||| ||
Sbjct 34753 ATGTACAAGAAAGCCGAAGCT-TCCTTCTGGACCGCCGAGGAGATTGATCTCTCCAAAGA 34811
Query 42368 CACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAAAAACATAC 42423
| || |||| | || |||||| |||| || | |||| || | | |
Sbjct 34812 TCTGCACGACTGGAACA-ACCGTCTGAATGACGATGAGCGTTATTTCATCTCTCATGTCC 34870
Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483
| ||||||||||| ||||||||||| || || ||||||||| || | |||| |
Sbjct 34871 TTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGCTTCAGCA 34930
Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543
| ||||||||| |||||| || |||||||||||||||||||| || ||||||
Sbjct 34931 ATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATCATGATTGAGAACA 34990
Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC 42592
| || || ||| ||| || ||| | | || |||||| ||| ||
Sbjct 34991 TTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGCC 35039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944336744718080
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