Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq113 141 2e-28 seq1 131 3e-25 >seq113 Length=654563 Score = 141 bits (156), Expect = 2e-28 Identities = 325/479 (68%), Gaps = 18/479 (4%) Strand=Plus/Plus Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 ||||| | ||| |||| || ||| | || || | || |||||| || || ||| || Sbjct 85999 GGGCAGAACAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTC 86058 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC--TCGTCCGAGCCAGTGTTCTTCCTCA 245087 || ||||| | ||| || || | || ||||| || ||| || |||||| | | Sbjct 86059 CACAGGGCGTAGAACAGATCACGGG--CTCTGACTTCCTCCTTACCGTGGTTCTTGCGAA 86116 Query 245088 GCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGG 245147 | |||| || || |||| ||| | ||||| ||||| | ||| | ||| | ||||| | Sbjct 86117 GATCCAGGAACTCGAAGATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAG 86176 Query 245148 GCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTA 245206 | |||||||| ||||||||||| || ||| | || | |||||| | ||| || | Sbjct 86177 GGCGCTTGTTACCTCCCTGGTCGACATACCTAGC-AGTGTTGTTGAACACGCGAAGCATG 86235 Query 245207 GGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGG 245266 || || || ||||||||| || || ||||| ||||||| ||| || | | || Sbjct 86236 GGAACAATACCGTTAGAGGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCAC---GG 86292 Query 245267 TTGCTGATGGAC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322 ||| | || || | ||| | ||||| || ||| ||||| | ||| || |||| Sbjct 86293 ATGC-GGTGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTT 86351 Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382 | |||||| || ||||| ||||| ||| |||||| | || || ||||| || | Sbjct 86352 AAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGC 86411 Query 245383 CAGCTGGGGCTTGGGGCTGCACGAG--TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 |||||||| |||||| | || || ||||||||||| || || || || ||||| Sbjct 86412 AAGCTGGGG-TTGGGG-AGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTA 86468 >seq1 Length=367421 Score = 131 bits (144), Expect = 3e-25 Identities = 296/442 (67%), Gaps = 5/442 (1%) Strand=Plus/Plus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || || ||||| |||| || ||||| ||||| ||||| || | || || ||||||||| Sbjct 35204 CTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTC 35263 Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 ||||| ||| || | | |||||| || ||||| ||||| ||||| |||||| | Sbjct 35264 TGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGT 35323 Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884 |||||||| ||||| | |||||||| ||||| || || || ||| | | || Sbjct 35324 GACGAGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTTC---TCACTTGAACCATCGC 35380 Query 42885 CCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 ||| ||| || | || || ||| ||||| |||| || || |||||||| Sbjct 35381 CCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTGAACAGGAGTTC 35440 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || | | || || || | || | ||||||||| | || |||||| |||| Sbjct 35441 TTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTAT 35500 Query 43005 ATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACAC 43063 || ||| ||| || || | || | || | ||| || | || |||| | Sbjct 35501 ATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAG-TACTTCAACTC 35559 Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123 || |||||||||||| ||||| | |||||| | | || ||||| ||||| || || Sbjct 35560 TCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGA 35619 Query 43124 GAAGCGCGTCGCCGACTACCAG 43145 |||||| || | ||||||||| Sbjct 35620 GAAGCGTGTTGGTGACTACCAG 35641 Score = 113 bits (124), Expect = 9e-20 Identities = 202/289 (70%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA 42367 ||||||||||| || | || | ||| ||||||||||||||||||||| || |||| || Sbjct 34753 ATGTACAAGAAAGCCGAAGCT-TCCTTCTGGACCGCCGAGGAGATTGATCTCTCCAAAGA 34811 Query 42368 CACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAAAAACATAC 42423 | || |||| | || |||||| |||| || | |||| || | | | Sbjct 34812 TCTGCACGACTGGAACA-ACCGTCTGAATGACGATGAGCGTTATTTCATCTCTCATGTCC 34870 Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 | ||||||||||| ||||||||||| || || ||||||||| || | |||| | Sbjct 34871 TTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGCTTCAGCA 34930 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 | ||||||||| |||||| || |||||||||||||||||||| || |||||| Sbjct 34931 ATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATCATGATTGAGAACA 34990 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC 42592 | || || ||| ||| || ||| | | || |||||| ||| || Sbjct 34991 TTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGCC 35039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336744718080