Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq192 136 9e-27 seq44 111 4e-19 seq187 89.7 1e-12 >seq192 Length=879878 Score = 136 bits (150), Expect = 9e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | || || || || | |||||| || ||||| ||||| || |||| Sbjct 213690 TCCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGA 213631 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | || ||||| || || || || |||||||| |||||||| || | || Sbjct 213630 GAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGG 213571 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTA 288424 ||| || || || || ||||| || ||| |||||||| || || | ||| || || | Sbjct 213570 GATGCCCTCCTTGTCTTGGATCTT-GCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCA 213512 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || ||||| ||||| |||||||||||||| |||||||| Sbjct 213511 CCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 213463 Score = 131 bits (144), Expect = 4e-25 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | || ||| || || || |||||||||| Sbjct 213233 CCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGAC 213174 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || || || || || ||||| ||||||||||| || | ||| Sbjct 213173 AAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGG 213114 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || ||||| || || | |||||| ||||| || Sbjct 213113 ATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCACC 213054 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 ||||| || || ||||| || || || |||||||||| Sbjct 213053 TCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGA 213017 Score = 125 bits (138), Expect = 2e-23 Identities = 170/233 (73%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || ||||| | ||| ||| ||||||||||| || | Sbjct 213465 CATG-CCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAAT 213407 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | | || || || ||||| | ||| ||||| || ||||| |||||||||||| | Sbjct 213406 CAGACAAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAG 213347 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGAT 288420 ||||| || || ||||||||||| || ||| || || || || || | || || Sbjct 213346 GAGGGATACCCTCCTTATCCTGGATCTT-GCTCTTGACATTGTCGATGGTGTCTGAAGAC 213288 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| | ||||| ||||| || || |||||||| ||||| || ||||| Sbjct 213287 TCTACTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 213235 Score = 118 bits (130), Expect = 3e-21 Identities = 166/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || || || | || ||| || ||||| ||||| | Sbjct 212929 CATG-CCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAAT 212871 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || ||||| || || || | || || || ||||| |||| ||||| || | Sbjct 212870 CGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAG 212811 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || |||||||| || |||| || || || || |||| ||||| || | Sbjct 212810 GAGGGATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACT 212751 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || | ||||| ||||| || || |||||||||||||| |||||||| Sbjct 212750 CGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 212699 >seq44 Length=120029 Score = 111 bits (122), Expect = 4e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || || || || |||||| || ||||| || || || | || || || ||||||||| Sbjct 98525 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 98584 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || ||||| || | ||||| || || || |||||||| || || || ||||| || Sbjct 98585 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 98644 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 98645 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 98703 >seq187 Length=900278 Score = 89.7 bits (98), Expect = 1e-12 Identities = 245/367 (67%), Gaps = 10/367 (3%) Strand=Plus/Plus Query 325967 ATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAAC--AGC 326024 ||||| |||||||||| ||| |||| | || || | || ||| | |||||| ||| Sbjct 797975 ATAGGAGTGATGAACTCGATCAGGAACTCCGGGATCTTCAGCAGACT-GGGAAATTGAGC 798033 Query 326025 TATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 326084 || | ||||| |||| | || || ||| | |||||| |||| ||||||| Sbjct 798034 C-TGAAGGAAGTTGATGAGCAAGCCCTTGATATGACTGCCGTCATGATCCTGATCGGTCA 798092 Query 326085 TGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAA 326144 ||||||||| ||||||||| || ||| | || || |||| | || | || | Sbjct 798093 TGATCATCAAATGACCGTAGCGCAGCCCGCGGGTATCGGTGTATTCCTTCTTGTGCTGTA 798152 Query 326145 GGCCGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGA--TGCTTGCCACGGA 326202 |||| || | | |||| | |||||| | |||||||| | |||| | | || Sbjct 798153 GGCCAAGGAAGTTCTTGATATTTTGGATTTCCTGGTTCTTCGAAATCTGCT--CAAAAGA 798210 Query 326203 TGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACC 326262 ||||||||||| || | | |||||| || | ||||| || || | ||| | || Sbjct 798211 GGCATCGCGGACATTGAGCAATTTTCCTCGCAAGGGGAAGACACCGAAAAGGTCGGGTCC 798270 Query 326263 GACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGTCAGAATGA 326321 ||| |||| |||| || || ||||| | | | || || || || || |||| ||||| Sbjct 798271 GACGACGGCTCGCCCAGCCATGGCAAG-GCCTTTAGCCGAGTCACCTTCGGTCAAAATGA 798329 Query 326322 GAGTGCA 326328 | ||||| Sbjct 798330 GGGTGCA 798336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651256221024