Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13]
208 sequences; 28,240,437 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq187 95.1 3e-14
seq208 87.8 4e-12
>seq187
Length=900278
Score = 95.1 bits (104), Expect = 3e-14
Identities = 246/367 (67%), Gaps = 10/367 (3%)
Strand=Plus/Plus
Query 298088 ATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAAC--AGC 298145
||||| |||||||||| ||| |||| | || || | || ||| | |||||| |||
Sbjct 797975 ATAGGAGTGATGAACTCGATCAGGAACTCCGGGATCTTCAGCAGACT-GGGAAATTGAGC 798033
Query 298146 TATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 298205
|| | ||||| |||| | || || ||| | |||||| |||| |||||||
Sbjct 798034 C-TGAAGGAAGTTGATGAGCAAGCCCTTGATATGACTGCCGTCATGATCCTGATCGGTCA 798092
Query 298206 TGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAA 298265
||||||||| ||||||||| || ||| | || || |||| | || | || |
Sbjct 798093 TGATCATCAAATGACCGTAGCGCAGCCCGCGGGTATCGGTGTATTCCTTCTTGTGCTGTA 798152
Query 298266 GGCCGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGA--TGCTTGCCACGGA 298323
|||| || | | |||| | |||||| | |||||||| | |||| | | ||
Sbjct 798153 GGCCAAGGAAGTTCTTGATATTTTGGATTTCCTGGTTCTTCGAAATCTGCT--CAAAAGA 798210
Query 298324 TGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACC 298383
|||||||||||||| | | |||||| || | ||||| || || | ||| | ||
Sbjct 798211 GGCATCGCGGACATTGAGCAATTTTCCTCGCAAGGGGAAGACACCGAAAAGGTCGGGTCC 798270
Query 298384 GACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGTCAGAATGA 298442
||| |||| |||| || || ||||| | | | || || || || || |||| |||||
Sbjct 798271 GACGACGGCTCGCCCAGCCATGGCAAG-GCCTTTAGCCGAGTCACCTTCGGTCAAAATGA 798329
Query 298443 GAGTGCA 298449
| |||||
Sbjct 798330 GGGTGCA 798336
>seq208
Length=169856
Score = 87.8 bits (96), Expect = 4e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 330459 CTTTGCAATATCTGTTCCACTCCCCATGGCACATCCAACGTCTGCCTCCTTAAGAGCCGG 330518
||| |||| ||| |||||| | ||||||||| |||| ||| |||| ||| | ||| ||
Sbjct 32599 CTTAGCAACATCCGTTCCAGTACCCATGGCAACACCAATGTCGGCCTTCTTCAAAGCAGG 32540
Query 330519 AGCATCGTTAGCACCATCGCCACTCGATGCAACGACATGACCAAGA 330564
||||||||| |||| |||||| || |||||| ||||| || |||
Sbjct 32539 AGCATCGTTGACACCGTCGCCAGTCATTGCAACCACATGGCCCAGA 32494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102877060824800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |