Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13]
208 sequences; 28,240,437 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq1 161 1e-34
seq44 95.1 1e-14
>seq1
Length=367421
Score = 161 bits (178), Expect = 1e-34
Identities = 309/450 (69%), Gaps = 19/450 (4%)
Strand=Plus/Plus
Query 52396 AGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCA 52455
||||| | |||||||||||| || ||||| | ||||| || || ||||| |||
Sbjct 35199 AGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCA 35258
Query 52456 TCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATAT 52515
|||| | | || | | ||| | ||||| || || || ||| ||||||| | || |
Sbjct 35259 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCT 35318
Query 52516 CGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCG 52575
| || ||||| ||||||||||| |||||||| ||||| || | | | ||| |
Sbjct 35319 CTCGTGACGAGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTT---CTCACTTGAACC 35375
Query 52576 AAAAATTGGATTCGGACACGA----TCCTGAGCATGTTCAAG--GAGGCGGTGGCTATCG 52629
| | | || ||| || | |||| || || | ||||| ||||| || |
Sbjct 35376 A-----TCGCCCCG-ACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTG 35429
Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCA 52689
|| ||||||| || || | ||| || || || | || |||||||||||| | || |
Sbjct 35430 AACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAA 35489
Query 52690 TGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA--AA 52747
||||| |||| || ||||| || || ||||| |||||||| |||| | | || ||
Sbjct 35490 TGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGT--TGCTCTTGGAAACAAGAA 35547
Query 52748 GTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGAC 52807
|||||||||| ||| ||| || || || || ||| | | || ||||||| || |||||
Sbjct 35548 GTACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGAC 35607
Query 52808 CAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||| || |||||||| || || || ||
Sbjct 35608 GAACTTCTTTGAGAAGCGTGTTGGTGACTA 35637
>seq44
Length=120029
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| ||||||||||||||||||| || || ||||| || || ||||| | |||
Sbjct 98523 CCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 98582
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544
| || ||||| ||||| || || ||||| || ||||| ||| || || | | |
Sbjct 98583 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 98642
Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604
| | ||||||| ||||||| || |||| || | || ||||| ||||| || || || |
Sbjct 98643 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 98702
Query 138605 AA 138606
||
Sbjct 98703 AA 98704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261109717760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |