Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq192 123 2e-23 seq44 109 5e-19 seq145 107 2e-18 seq1 104 2e-17 >seq192 Length=879878 Score = 123 bits (136), Expect = 2e-23 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || ||||| ||| | || || ||| || || Sbjct 213463 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTCC 213522 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || |||| | |||| || |||| ||||| ||||| || || | |||| Sbjct 213523 GACACGATTGACAACG--TGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACC 213580 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || ||| |||| || | | | |||||| ||| |||| Sbjct 213581 AGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACA 213640 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | || |||||||| ||| ||||| || ||||||||||| || | || || Sbjct 213641 ATATTCAAAAGGAGAGC-ACGCTCCACCTGGTGCTGCGTCTGCGTGGTGG 213689 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| ||||||||| | || |||||| ||| | Sbjct 212699 ATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 212758 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || || | || || ||||| || || | ||||| Sbjct 212759 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 212818 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| ||| ||||| ||||| || || | ||||| || ||| || ||| Sbjct 212819 CAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAAC 212878 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || ||||| |||| || ||| Sbjct 212879 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTCCGT 212914 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || |||||||| || || ||||| | || || ||| | | Sbjct 213235 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 213294 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || |||| || || ||||| || || | || | Sbjct 213295 GACACCATCGACAATG--TCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATC 213352 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| ||||| | || || || || || || || | || ||| | || |||| Sbjct 213353 AACAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACA 213412 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 | |||||||||||| | || |||||| |||| || ||| || | || ||| Sbjct 213413 ATATCCAAAAGGAATCCACACTGCATCTGGTCCTCCGTCTGCGTGGTGGC 213462 >seq44 Length=120029 Score = 109 bits (120), Expect = 5e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| ||||||| ||| | | ||||| | | Sbjct 98703 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 98644 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || | || |||| ||||| ||||| || ||| | ||||| ||||| || Sbjct 98643 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCT 98585 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| || || ||||| || || | |||||||| | |||||||||||| || || Sbjct 98584 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATTCAGAA 98525 Query 38432 GG 38433 || Sbjct 98524 GG 98523 >seq145 Length=150552 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| |||||||| ||| ||||||| ||||| || || | ||| ||||| ||||| || Sbjct 132941 GACAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 133000 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| || |||||| |||||||||||||| ||||| |||| ||||| | ||||| Sbjct 133001 GACGGTCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTC 133060 Query 38457 CGTTTGAGAGGCGG 38470 ||| || | || || Sbjct 133061 CGTCTGCGTGGTGG 133074 >seq1 Length=367421 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 |||||||||||| |||| |||||||| | || ||||| |||||| |||||| | Sbjct 35353 GCAAGCAAAGTCTGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAG 35294 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 || ||||| | ||| || || || ||||| || |||| || ||| || || || || Sbjct 35293 ACCAGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAA 35234 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073 || ||||| || || ||||| ||||| ||||||| |||| || | ||| || | Sbjct 35233 GATTCCCTCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGA 35174 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTT 133100 ||||| | || ||||| | |||||| Sbjct 35173 AATCCATCTCATGGCCCACTGGGCCTT 35147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171499550720