Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13]
208 sequences; 28,240,437 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1 122 2e-22
>seq1
Length=367421
Score = 122 bits (134), Expect = 2e-22
Identities = 163/224 (73%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 25816 ATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGC 25875
|||| || |||||| | ||||||||||| ||||| || |||| || |
Sbjct 35138 ATCAGGAAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCTACTTTCGCT 35197
Query 25876 GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCC 25935
|||| || || ||||| || ||||||||||| ||||||||| || || ||||| ||
Sbjct 35198 CAGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCC 35257
Query 25936 ATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCAT 25994
||||||||||| ||| || || ||||| || || ||||| ||||||||||||||
Sbjct 35258 ATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCT-CACTTTCTCCAACGAGCTCAT 35316
Query 25995 CAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038
| | |||||||| || |||| ||| ||||| ||||| ||||
Sbjct 35317 CTCTCGTGACGAGGGACTGCACACAGACTTTGCTTGCCTTCTCT 35360
Score = 89.7 bits (98), Expect = 1e-12
Identities = 162/234 (69%), Gaps = 5/234 (2%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | ||||||||||| || || || |||||||||||| |||||||||||
Sbjct 34744 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 34803
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594
|||| || || ||| |||| || | || ||||| ||| || | ||| |
Sbjct 34804 TCCAAAGATCTGCACGACTGGAACAACCGTCTGAATGACGATGAGCGTTATTTCATCTCT 34863
Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
| || | || ||||| || |||||||| || || || || ||||| ||| ||| |
Sbjct 34864 CATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGC 34923
Query 25654 TTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|||| || || ||||| || | | ||||| || |||||||| ||||||||
Sbjct 34924 TTCAGCAATGAGGTGCAGGTGCCT-GAGGCTCGATGCTTCTACGGCTTCCAGAT 34976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928842385003520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |