Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq110 127 2e-23 seq14 113 6e-19 seq113 104 3e-16 seq1 86.0 8e-11 >seq110 Length=226234 Score = 127 bits (140), Expect = 2e-23 Identities = 111/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 || |||||||||||||| || || |||||| |||||||| || | ||||| |||||| Sbjct 16433 GATAGCATCGGCGGCACCGTCACCTGCGTGATCCGCAACGTCCCCGTCGGCCTGGGCGAG 16374 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| ||| || ||||||||||| ||||| |||||| Sbjct 16373 CCTTGCTTCGACAAGCTCGAGGCCAAGCTGGCGCACGCCATGCTCAGCATCCCCGCCACC 16314 Query 19167 AAGGGATTCGAGATTGGC 19184 ||||| || ||||| ||| Sbjct 16313 AAGGGCTTTGAGATCGGC 16296 >seq14 Length=853550 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||| ||||| ||||| |||| | ||| | || |||||| |||| || ||| Sbjct 775539 GCTGCCAACTATCTCGATATCAAAGCTCTCTTGGATGTCGGCTGCAAGACTGTTGCGAAC 775480 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| ||||| ||||| ||||||||||| ||||| || ||| Sbjct 775479 ATGATCAAGGGCAAGTCCCCCGAAGAGATTCGCAAGACCTTCAACATTCAGAACG 775425 >seq113 Length=654563 Score = 104 bits (114), Expect = 3e-16 Identities = 203/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||| || | || |||| ||| || ||||| |||||||| || | ||||| || Sbjct 86193 CTGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGA 86252 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 || || ||||| | | ||||| ||| | ||| || | ||| || || ||| Sbjct 86253 GGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCC 86312 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| ||||| || | ||| ||||| | || || || || ||||||||||| ||||| Sbjct 86313 GATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTC 86372 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || ||||||| || ||||| ||||| |||| || || || | || || Sbjct 86373 AATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACC 86432 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 || ||||| || || || | || ||||| | | | | |||||| || |||||| Sbjct 86433 AGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGT 86492 >seq1 Length=367421 Score = 86.0 bits (94), Expect = 8e-11 Identities = 164/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| ||| || ||||| ||||| || | |||||||| Sbjct 35646 GCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATA 35587 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||| | ||| |||||||| | ||| ||| ||| | | ||| || | | Sbjct 35586 CTTTCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACC 35527 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 | ||| || || || || ||||| || ||||||||||| || | ||||||||| | | Sbjct 35526 AACAGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGG 35467 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || || | || ||| ||||| | || || | || ||||| ||||| Sbjct 35466 AGAGCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATA 35407 Query 868931 AT 868932 || Sbjct 35406 AT 35405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107122130545936