Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13]
208 sequences; 28,240,437 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 5e-19
>seq1
Length=367421
Score = 109 bits (120), Expect = 5e-19
Identities = 331/509 (65%), Gaps = 27/509 (5%)
Strand=Plus/Plus
Query 46773 AAAAAGGCCCAGTGGGCCATGAAGTGGATC---GAGAGCGAGACCGCCACGCTGGCCGAG 46829
|| ||||||||||||||||||| ||||| || | || | || | || ||
Sbjct 35144 AAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCT---ACTTTCGCTCAG 35200
Query 46830 CGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATT 46889
||| | ||||| ||||| || || || | ||||| || || |||||| ||||
Sbjct 35201 CGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATC 35260
Query 46890 TTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCG 46949
|| | | || | ||| | ||||| || || || ||| |||||| | |||||
Sbjct 35261 TTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCT 35320
Query 46950 CGCGACGAAGGACTACACACGGACTTTGCGTG---TCTCTATTACAAGACGCGCGTGAAT 47006
|| ||||| ||||| ||||| |||||||| || ||||| || | | | ||||
Sbjct 35321 CGTGACGAGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTT------CTCACTTGAAC 35374
Query 47007 GAGAAATTAAACTCGGACACGA----TCCTGAGCATGTTTAGG--GAGGCGGTGAGCATC 47060
| | | |||| || | |||| || || | ||||| ||| |||
Sbjct 35375 CATCG------CCCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATT 35428
Query 47061 GAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT 47120
||| ||||||| || || | || || || || || | |||||||||||| | ||
Sbjct 35429 GAACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTA 35488
Query 47121 ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAA 47180
|||||| | ||||||||||| || || ||||| |||||||| || ||| | |||
Sbjct 35489 ATGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAG 35548
Query 47181 TATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACC 47240
|| || || ||| || || || || || ||| | | || ||||| | || || ||
Sbjct 35549 TACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACG 35608
Query 47241 AATTTTTTCGAGAAACGAGTCGGAGAGTA 47269
|| || || ||||| || || || || ||
Sbjct 35609 AACTTCTTTGAGAAGCGTGTTGGTGACTA 35637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476609960810880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |