Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 >seq1 Length=367421 Score = 109 bits (120), Expect = 5e-19 Identities = 331/509 (65%), Gaps = 27/509 (5%) Strand=Plus/Plus Query 46773 AAAAAGGCCCAGTGGGCCATGAAGTGGATC---GAGAGCGAGACCGCCACGCTGGCCGAG 46829 || ||||||||||||||||||| ||||| || | || | || | || || Sbjct 35144 AAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCT---ACTTTCGCTCAG 35200 Query 46830 CGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATT 46889 ||| | ||||| ||||| || || || | ||||| || || |||||| |||| Sbjct 35201 CGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATC 35260 Query 46890 TTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCG 46949 || | | || | ||| | ||||| || || || ||| |||||| | ||||| Sbjct 35261 TTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCT 35320 Query 46950 CGCGACGAAGGACTACACACGGACTTTGCGTG---TCTCTATTACAAGACGCGCGTGAAT 47006 || ||||| ||||| ||||| |||||||| || ||||| || | | | |||| Sbjct 35321 CGTGACGAGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTT------CTCACTTGAAC 35374 Query 47007 GAGAAATTAAACTCGGACACGA----TCCTGAGCATGTTTAGG--GAGGCGGTGAGCATC 47060 | | | |||| || | |||| || || | ||||| ||| ||| Sbjct 35375 CATCG------CCCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATT 35428 Query 47061 GAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCT 47120 ||| ||||||| || || | || || || || || | |||||||||||| | || Sbjct 35429 GAACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTA 35488 Query 47121 ATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAA 47180 |||||| | ||||||||||| || || ||||| |||||||| || ||| | ||| Sbjct 35489 ATGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAG 35548 Query 47181 TATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACC 47240 || || || ||| || || || || || ||| | | || ||||| | || || || Sbjct 35549 TACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACG 35608 Query 47241 AATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 || || || ||||| || || || || || Sbjct 35609 AACTTCTTTGAGAAGCGTGTTGGTGACTA 35637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609960810880