Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq113 100 3e-16 seq45 89.7 6e-13 >seq1 Length=367421 Score = 118 bits (130), Expect = 1e-21 Identities = 164/226 (73%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 94790 |||||| ||||| ||||| || | ||||| |||| ||| || |||| | || Sbjct 35128 AGTTCCTTGTATCAGGAAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATC 35187 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 | | || ||| |||| || | || || || ||| ||||| ||||| |||||||| Sbjct 35188 ---TACTTTCGCTCAGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGG 35244 Query 94851 TTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 || || ||| | || | ||||| |||||||| || | ||||| |||||| |||| Sbjct 35245 ATCTTT-TGCTTCCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCT 35303 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||| |||||||||||||||||||| ||| ||| ||||| Sbjct 35304 CCAACGAGCTCATCTCTCGTGACGAGGGACTGCACACAGACTTTGC 35349 >seq113 Length=654563 Score = 100 bits (110), Expect = 3e-16 Identities = 457/714 (64%), Gaps = 8/714 (1%) Strand=Plus/Minus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | |||||||| || |||| ||||||||||| | || | ||||||||||| || Sbjct 85835 TGGTATGCTATTCTTGAGGCTCAGACCGAGACTGGCAACCCCTTTATGCTTTACAAGGAT 85776 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 ||||| ||| | ||||| || || ||||| |||| || || |||||||| || Sbjct 85775 GCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGAACTATTCGCAGCTCCAATCTTTGC 85716 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 || || ||| | || | | | || || ||||| || ||||| || || || Sbjct 85715 ACGGAGATCATTGAGTACAGTGCTCCTGACGAAGTTGCTGTCTGCAACCTGGCTTCTCTC 85656 Query 105068 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT-TGATTATGAAAAACTCCACGA 105126 || || || | | ||| || | | | || | | ||| | | || || ||||| Sbjct 85655 GCGCTTCCTACTTTTGTCGACGCGGCC-CGTGGAGAGTATGACTTCGGCAAGCTGCACGA 85597 Query 105127 AGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT 105186 ||| | | | ||| | |||| |||||||| ||| | ||||| || Sbjct 85596 GGTTGTGCAGGTCTTGGTTCGTAACTTGAACAAGATTATTGATGTAAACTACTACCCTGT 85537 Query 105187 TG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTC 105245 | ||| | | | | | || ||| | || || || |||| ||| ||||| | ||| Sbjct 85536 TCCAGAGGCCAAGAAGAGC-AACATGCGGCATCGCCCCATTGCTCTTGGTGTCAATGGTT 85478 Query 105246 TCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATC 105304 | || |||| ||| || | || |||| | || || |||| |||||| | | | Sbjct 85477 TGGCCGATGCCTTCCTTGCCCTG-CGCCTGCCGTTCGACTCCGCCGAAGCAAGACAGCTA 85419 Query 105305 AATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG-GCGAGTTCAGAGTTGGC 105363 || | || ||||||||||| ||||||| ||| |||| || || ||| |||| Sbjct 85418 AACATCCAGATCTTTGAGACCATCTATCACGGTGCT-TTGACTGCATCTTGTGAGCTGGC 85360 Query 105364 AGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCA 105423 ||| |||||| |||||||| | ||||| || || | || || || | || || Sbjct 85359 CAAGGAGTTTGGTCCTTATGAAACTTACGAGGGCTCCCCCGTCTCTCAGGGTATTCTCCA 85300 Query 105424 ATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACG 105483 | |||||||||||| | ||| | | || |||||||| |||| |||| Sbjct 85299 GTATGATATGTGGGACAGAACCCCCACGGACCTCTGGGACTGGGATTCTCTGAAGGCGAA 85240 Query 105484 CATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCAC 105543 || || | ||| ||||||||||| | | |||| || ||||| || || ||| Sbjct 85239 GATTGCCCAGCACGGTGTTCGTAACAGTTTGTTGGTGGCACCGATGCCCACCGCAAGCAC 85180 Query 105544 CGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 | || || |||| || ||||| ||||| || ||||| |||||||||| Sbjct 85179 CAGCCAGATTCTGGGCTTCAACGAATGTTTTGAGCCTTACACCTCGAACATCTA 85126 >seq45 Length=69030 Score = 89.7 bits (98), Expect = 6e-13 Identities = 216/325 (66%), Gaps = 19/325 (6%) Strand=Plus/Minus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 |||||||||||||| |||| | ||||| | || ||||| |||||||| || Sbjct 18907 AAACCATCCATCTCCGTCAGGATCTGGTTCAGGGTGCTCTCCCGCTCATCATTACCT--- 18851 Query 9674 ATACCACC--AGCACTGCGTTGCTTT-------CCCACGGCATCAATCTCATCAATGAAG 9724 |||| ||| ||| | ||| | || | ||||| || |||||||||||| Sbjct 18850 ---CCACTGAAGCTCTGTTTAGCTCTAGATTTACCAATAGCATCGATTTCATCAATGAAG 18794 Query 9725 ACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCC 9784 | |||||| || ||| | || ||| | || ||||| || ||||| | || Sbjct 18793 ATGATGCAAGGGGCATTCTTCCGGGCGTTGGCGAAAAGATCACGGACACGGGAAGGACCG 18734 Query 9785 ACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTAG 9842 |||||||| |||||||| || || | | | || || | || ||| || || | Sbjct 18733 ACACCAACGAACATCTCGACGAACTCGGAACCGCTGACGCT--GAAGAAAGGCACGCCGG 18676 Query 9843 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 9902 ||||||| ||| |||| ||||| | |||||||| || || || ||| | ||||| Sbjct 18675 ATTCACCAGCAGTGGCCTTTGCGAGCAATGTCTTACCTGTGCCGGGAGGACCTGAGAGGA 18616 Query 9903 GGGCACCTCGTGGAATCTTGGCGCC 9927 |||||| || || |||||||| || Sbjct 18615 TGGCACCGCGAGGGATCTTGGCACC 18591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259283521920