Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq113 161 1e-34 seq1 111 2e-19 >seq113 Length=654563 Score = 161 bits (178), Expect = 1e-34 Identities = 383/576 (66%), Gaps = 2/576 (0%) Strand=Plus/Minus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | || ||||| || ||||| ||||| |||||| || | | | | Sbjct 86558 CCGCAGCACTTGTTGATGCGTGTTGCGGTTGGCATTCATGGCAACAATATTGAAAAGGCC 86499 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 ||||| ||| |||| ||| ||||| | |||||| || || | || || || ||| Sbjct 86498 ATTGAGACCTACCACCTCATGTCTCAGAAATACTTCACTCATGCTTCTCCTACTCTGTTC 86439 Query 19223 AACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGAC 19282 || || ||||| | | || ||| | || || ||||| || | ||||||||| || Sbjct 86438 AATGCTGGTACTCCCCAACCCCAGCTTGCGTCTTGCTTCCTCGTCGATATGAAGGAGGAT 86379 Query 19283 AGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGG 19342 ||||||||||| |||||||| || || ||| || || ||||| ||| | || Sbjct 86378 AGCATTGAGGGTATCTACGACACCCTTAAGACTTGTGCCATGATCTCGAAGACAGCTGGC 86319 Query 19343 GGTATCGGGATCCACTGCTCGAAT-ATCCGGTCGAGTGGTACACGAATCAATGGGACGAA 19401 |||||||| | || | || ||||| | | || | || ||| || || Sbjct 86318 GGTATCGGCCTTAAC-GTTCACCGCATCCGTGCCACAGGCTCCTACATTGGTGGCACTAA 86260 Query 19402 CGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGT 19461 || | ||||||| || || ||||| ||||| ||||||||||| || ||||| || Sbjct 86259 TGGGTCCTCTAACGGTATTGTTCCCATGCTTCGCGTGTTCAACAACACTGCTAGGTATGT 86200 Query 19462 CAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGC 19521 | ||||||| || ||| ||| ||| | || || || ||||||||||| ||||| || Sbjct 86199 CGACCAGGGAGGTAACAAGCGCCCTGGCGCTTTTGCTATTTACCTCGAGCCTTGGCATGC 86140 Query 19522 GGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCG 19581 || || | || ||||| || || ||| |||||| ||| | ||||| | | || Sbjct 86139 CGATATCTTCGAGTTCCTGGATCTTCGCAAGAACCACGGTAAGGAGGAAGTCAGAGCCCG 86080 Query 19582 CGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGA 19641 || || ||| ||| |||||| || || || |||||| || |||||| ||| Sbjct 86079 TGATCTGTTCTACGCCCTGTGGACCCCTGATCTGTTCATGAAGCGAGTTGAGTCCAACGG 86020 Query 19642 AGAATGGCACCTGATGTGCCCGCACGAATGCCCTGG 19677 || ||| ||| | ||||| | ||| |||||| Sbjct 86019 TGACTGGACTCTGTTCTGCCCCAATGAAGCCCCTGG 85984 Score = 141 bits (156), Expect = 1e-28 Identities = 391/597 (65%), Gaps = 2/597 (0%) Strand=Plus/Plus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||| ||||| | || || ||| || | ||||| | ||| |||||| || Sbjct 85963 TCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTCCAGTCACCG 86022 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | |||||| || |||||| || || ||| |||||||||| ||| || || ||| Sbjct 86023 TTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAACAGATCACGG 86082 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 | | ||||| | || |||||| || || || || || || | ||| ||||| Sbjct 86083 GCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAGATATCGGCA 86142 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| ||||| || || || || || | || ||||||| || ||||||| ||| Sbjct 86143 TGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCCTGGTCGACA 86202 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 |||| || ||||||||||| || || |||||||| || || |||| | | || || Sbjct 86203 TACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAGGACCCATTA 86262 Query 79606 GTCCCGTTGATTCGTGTACCGCTCGCCCGAATG-TTCGAGCAGTGGATTCCGATGCCCCC 79664 || || || | || | || || ||| || | || | ||||| || || Sbjct 86263 GTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAAC-GTTAAGGCCGATACCGCC 86321 Query 79665 GGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTC 79724 | ||| ||||| || || ||| || || |||||||| ||||| || || Sbjct 86322 AGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCAATGCTATC 86381 Query 79725 GTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAA 79784 ||||||||| |||| |||||||| || | ||| || | | ||||| || ||||| Sbjct 86382 CTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACCAGCATTGAA 86441 Query 79785 GAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGAC 79844 || || || | || || |||||| | || || ||| || | ||| ||||| || | Sbjct 86442 CAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGTCTCAATGGC 86501 Query 79845 GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGG 79901 | | || ||| || ||||| ||||| || ||||| || | || ||| || Sbjct 86502 CTTTTCAATATTGTTGCCATGAATGCCAACCGCAACACGCATCAACAAGTGCTGCGG 86558 >seq1 Length=367421 Score = 111 bits (122), Expect = 2e-19 Identities = 288/425 (68%), Gaps = 18/425 (4%) Strand=Plus/Plus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 ||||| |||||||| |||||||| || || | | || |||||||| || ||||||||| Sbjct 35222 GTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCTGGCTGAAGAAGCGTGGC 35281 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAG 60122 | ||||| || || | ||||||||||||||| || || || |||||||| || || Sbjct 35282 TTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGACTGCACACA 35341 Query 60123 GAGTTTGCAGTGAC-GCTCTATTCACACCTATTGGAAAAATGCCCTTCC---AAGGATAT 60178 || ||||| || | |||| ||| ||| ||| | | |||| | |||| ||| Sbjct 35342 GACTTTGC-TTGCCTTCTCTTTTCTCAC---TTGAACCATCGCCCCGACAAGAAGGTTAT 35397 Query 60179 TCACAAGATTGTTCAGTG-GGCT-TGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTT 60236 | | | ||| || || |||| || | || | || |||||| | ||||| || ||| Sbjct 35398 TGAGGATATT-ATCGTTGAGGCTGTGGCCATTGAACAG-GAGTTCTTGACAGACGCTCTT 35455 Query 60237 CC--ATGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCG 60294 || ||| ||| | || ||| || || |||| ||||| ||| |||| || | Sbjct 35456 CCTGTTGC--TCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTATATTGAGTTCGTTG 35513 Query 60295 CGGACCGCCTCATGGCCCAGTTTGGAGA-AGGACCAATTTACGGCGTGAATAACCCTTTC 60353 | || || || ||| ||||| | | || | || | | ||||| ||| Sbjct 35514 CTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAGTACTT-CAACTCTCCCAACCCCTTC 35572 Query 60354 GACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGG 60413 |||| ||||| | |||||| | | ||| ||||| ||||||||||||||||| || || Sbjct 35573 GACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGAGAAGCGTGTTGGT 35632 Query 60414 GATTA 60418 || || Sbjct 35633 GACTA 35637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523373835520