Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13]
208 sequences; 28,240,437 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq113 221 2e-52
>seq113
Length=654563
Score = 221 bits (244), Expect = 2e-52
Identities = 592/899 (66%), Gaps = 12/899 (1%)
Strand=Plus/Plus
Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984
||||| ||||| || ||||||| |||| |||||| |||||| ||||| | || | |
Sbjct 85954 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 86013
Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044
|||||||| | || |||||| ||||| || |||||||| |||| || || ||
Sbjct 86014 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 86073
Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104
||||| |||| ||| ||| || || || ||||| |||||| || ||||| |
Sbjct 86074 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 86133
Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164
||||| | |||||| || || || || || || | | | ||||| || || |||||||||
Sbjct 86134 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 86193
Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224
|| || | ||| || || ||||| || | || | | ||| |||| ||||||||||||
Sbjct 86194 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 86253
Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284
| ||||| || ||| ||| || || | || || || || | | ||
Sbjct 86254 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 86313
Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344
|| || || || |||| || || | || ||| || | || ||||||||||||||
Sbjct 86314 ATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCA 86373
Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGAC---ATTTGATGATGAACAGTT 78401
|| || || ||| |||| | | || | ||| |||| | || | || |||
Sbjct 86374 ATGCTATCCTCCTTCATATCGACGAGGA---AGCAAGACGCAAGCTGGGGTTGGGGAGTA 86430
Query 78402 CCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTAT 78461
|| ||||| || | || ||||| ||||| || || |||| | ||| | || | |||
Sbjct 86431 CCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAG 86490
Query 78462 GTTTCAATAGCTGATTCTATGTCCCATTG--ATGAATTCCTACCGCTACACGCATCAACA 78519
|| ||||| || ||| || | ||| |||||| || ||||| |||||||||||||
Sbjct 86491 GTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAACA 86548
Query 78520 TATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAG 78579
||||| || | ||| | ||| ||| ||| || || ||| || || | |
Sbjct 86549 AGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTG 86608
Query 78580 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTT 78639
| || ||||| ||| ||||||| ||||| | || || | |||| |||| || || |
Sbjct 86609 TCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGCT 86668
Query 78640 TATCTTTGTATTTGGTAACAATATC-CATGACAGTAGTTGAAATAATAGGAGATCGTACA 78698
||| | ||| | ||||| || | | | | | ||||| || || | ||
Sbjct 86669 CATCAGCATGTTTCATGACAATTTCATACGTCTCT-TTCGAAATCATTGGCGCGGGTTGC 86727
Query 78699 CCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGttttttt 78758
||||| || |||||||||| | | || || || | || | || ||
Sbjct 86728 TTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCTTG 86787
Query 78759 GTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817
|||| |||||| || || || || ||||| | ||||||| || |||||||| || ||
Sbjct 86788 GTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGTG 86846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694666993861120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |