Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq192 131 4e-25 seq113 102 2e-16 >seq192 Length=879878 Score = 131 bits (144), Expect = 4e-25 Identities = 159/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || || || || |||||||| |||||||| | || || | ||||| Sbjct 213447 GAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATC 213388 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| || ||||| || || ||||| || | ||| || || | | ||| || ||||| Sbjct 213387 TTCAAGTTGCTTT--CCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTA 213330 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || |||||| | || | | |||||||| ||||||||| | || ||| Sbjct 213329 TCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATA 213270 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||||||||| ||||||| ||||| Sbjct 213269 GTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 213235 Score = 104 bits (114), Expect = 5e-17 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || |||||||| || || |||||||| ||||||| | ||| | ||||| Sbjct 212911 GAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATC 212852 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || ||||| || | | ||||||||| | | ||| || ||||| || Sbjct 212851 CTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATC 212792 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATA 152069 ||||| || |||||| | || | |||| || |||| || |||| || || Sbjct 212791 CTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGAC-CTCCAAG-GTGATG 212734 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||||||||||||||| ||||| | |||||| Sbjct 212733 GTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 212699 Score = 104 bits (114), Expect = 5e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| ||||| || |||||||||| | || ||||||||||| | || || ||||| Sbjct 213654 CTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAA 213595 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 ||| || | ||||||||| | | ||| || ||||| ||||| || || || || | Sbjct 213594 GATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTT 213535 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | |||| || ||| || || || ||||| || || || ||||||||||| || Sbjct 213534 GTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGAC 213475 Query 152093 GAAGACCTGCAT 152104 ||||| |||||| Sbjct 213474 GAAGATCTGCAT 213463 >seq113 Length=654563 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688 ||||| ||| | ||||| ||||||| || ||||||||||| || | ||||| ||| Sbjct 86072 TTCTACGCCCTGTGGACCCCTGATCTGTTCATGAAGCGAGTTGAGTCCAACGGTGACTGG 86013 Query 115689 AGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAG 115748 | || || || |||||||||||||||||| | | |||||||||||| |||||||| Sbjct 86012 ACTCTGTTCTGCCCCAATGAAGCCCCTGGTTTGGCAGATGTTTATGGTGATGAGTTTGAT 85953 Query 115749 AATCTTTACGAAAGGT 115764 |||||| ||| ||| Sbjct 85952 GCTCTTTATGAACGGT 85937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153817725067568