Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq192 178 3e-39 seq44 134 3e-26 seq201 95.1 3e-14 seq145 87.8 4e-12 >seq192 Length=879878 Score = 178 bits (196), Expect = 3e-39 Identities = 180/229 (79%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 ||||||||||| || || |||||||| | ||| ||| |||||||| ||||| |||| | Sbjct 213461 CCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGAC 213402 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || |||||||| || ||||| || || |||||||| | ||| ||||| ||| || Sbjct 213401 AAG-GTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGG 213343 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||||||||||| || |||||||| ||| || || | ||||| ||||| |||| || | Sbjct 213342 GATACCCTCCTTATCCTGGATCTT-GCTCTTGACATTGTCGATGGTGTCTGAAGACTCTA 213284 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | ||||| ||||| ||||| | |||||||||||| || ||||| Sbjct 213283 CTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 213235 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || ||||| || | || ||| || |||||||| || || | | Sbjct 212925 CCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAA 212866 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || || || || ||||| || || |||||| || Sbjct 212865 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGG 212806 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||| || || ||||| | || || | || |||||||| | ||||| Sbjct 212805 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACC 212746 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| ||||| | |||||| ||||| |||||||| Sbjct 212745 TCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 212699 Score = 143 bits (158), Expect = 6e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || ||||| || | |||||| || ||||| || ||||| || | Sbjct 213689 CCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAG 213630 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||||| || | || || || || ||||| | ||| || |||||| || Sbjct 213629 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 213570 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||||||||||||| ||||| || ||| | || || ||||| || | || || Sbjct 213569 ATGCCCTCCTTGTCTTGGATC-TTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCAC 213511 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || ||||| || || | |||||| ||||| |||||||| Sbjct 213510 CTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 213463 Score = 131 bits (144), Expect = 4e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| || ||||| || || || | || ||| || || ||||| ||||| | Sbjct 213234 ACCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGA 213175 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| |||||||||||||| | || || || || || |||| ||| || |||||| | Sbjct 213174 CAAG-GTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAG 213116 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | |||||||||||||| |||||||| | || ||| |||| || || || | ||| | Sbjct 213115 GGATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCA 213056 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 | |||||||| || ||||| || || | ||||| |||| Sbjct 213055 CCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGA 213017 >seq44 Length=120029 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || || ||||||||||| || |||||||||||||| || || || || || |||||| Sbjct 98525 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 98584 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || |||||| || |||||||||||||| |||||||| || || ||| | ||| Sbjct 98585 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 98644 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | || || ||||| || || ||||||||||||| ||||| ||||| Sbjct 98645 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 98703 >seq201 Length=604755 Score = 95.1 bits (104), Expect = 3e-14 Identities = 131/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 315656 TAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCT 315715 |||| | || || ||||| ||||| |||| || |||| | || |||||| ||| | Sbjct 280261 TAATGATAACGACACCACCCTCGAAAGTCTTGAGAGCCTTGGACAGGGCACCCAGAGAGT 280202 Query 315716 CGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAG 315775 | ||||| | | ||||||| ||||| || || ||||||||||| || | ||||| ||| Sbjct 280201 CACGGTCGAGATAGTTGGTGGGCTCGTCGAGGACGATGACGTGAGGACGCTGCCA-CGAG 280143 Query 315776 C-GGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATGA 315834 | |||| ||| |||| ||| | || ||||| ||||| || || || ||||| ||| Sbjct 280142 CAGGCGGCGAGGACGACCTTGACACGCTGACCACCGGACAGACCGCGCATACGAGAGTGA 280083 Query 315835 G 315835 | Sbjct 280082 G 280082 >seq145 Length=150552 Score = 87.8 bits (96), Expect = 4e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | || || || |||||||||||||||| Sbjct 133075 ACCACCACGCAGACGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 133016 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || ||||| || || || || || ||||||| ||| || ||||| || Sbjct 133015 GAGGGTACGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGG 132956 Query 282992 AATACCCTCCTTGTCT 283007 || |||||||||||| Sbjct 132955 GATTCCCTCCTTGTCT 132940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736410440032