Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13] 301 sequences; 28,526,023 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq187 140 5e-28 >seq187 Length=590751 Score = 140 bits (154), Expect = 5e-28 Identities = 572/903 (63%), Gaps = 89/903 (10%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 |||||| |||||||||| || || | || ||||| ||||| | ||| ||| | ||||| Sbjct 305077 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 305018 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||| || ||| |||| ||| | | ||| ||| ||| |||||| | || || || Sbjct 305017 TCCAAAGATCTGCACGACTGGAACAACCGTCTGAATGACGATGAGCGTTATTTCATCTCT 304958 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 || | | |||||||| || | ||| || |||||||| || || || ||||| || Sbjct 304957 CATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGC 304898 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257 ||| | ||| || | || |||| ||| ||||| ||||| ||||| |||||||| Sbjct 304897 TTCAGCAATGAGGTGCAGGTGCCTGAGGC-TCGATGCTTCTACGGCTTCCAGATCATGAT 304839 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC--- 125314 ||||||| | || ||||| | ||||| |||||||| | ||||| || || Sbjct 304838 TGAGAACATTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGCCTAA 304779 Query 125315 GCAACGTAAACACATGCTCTTTAACGCAATCGACAC------GGTGCCGTC--------- 125359 ||| || | || |||||| ||||||| || || | ||| ||| Sbjct 304778 GCAGCGGACCTAC---CTCTTTGACGCAATTGATACAAGTATGCTGCTGTCTCGTTTCTC 304722 Query 125360 -------------------------------------TATACGTAAAAAGGCTCAATGGG 125382 ||| | || ||||| || |||| Sbjct 304721 TCGTTTAGACCGATCACTAATTTCCTCTAGTTCCTTGTATCAGGAAGAAGGCCCAGTGGG 304662 Query 125383 TGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCG 125442 || | ||||| ||| | | ||| | | ||| | | || ||||| ||||||| Sbjct 304661 CCATGAGATGGATTTCTGATAAGGAATCTACTTTCGCTCAGCGCCTTGTGGCCTTCGCCG 304602 Query 125443 CCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCG 125502 | || ||||| ||||| || || || |||||| ||||||| ||||| |||||||| | Sbjct 304601 CTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCTGGCTGAAGAAGCGTG 304542 Query 125503 GACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACT 125562 | | ||||| || || || | |||||| | || ||||| |||||||| || ||| Sbjct 304541 GCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACGAGGGACTGCACA 304482 Query 125563 GTGACTTTGC---CATTCTACTGTTTCGCAACT--ATCTGCGTCCCGAGTGCAGATCCAG 125617 |||||||| | |||| || |||| || | | | || ||||| ||| || Sbjct 304481 CAGACTTTGCTTGCCTTCT-CT-TTTCTCACTTGAACCATCGCCCCGA--CAAGA---AG 304429 Query 125618 CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAAC 125677 | | ||| || | | || || || ||| || ||||| ||||| | || Sbjct 304428 -GTTATTGAGGATATTATCGTT------GAGGCTGTGGCCATTGAACAGGAGTTCTTGAC 304376 Query 125678 CGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGA 125737 || | || || || | | |||||||||| |||||||||||| |||| || || Sbjct 304375 AGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTATATTGA 304316 Query 125738 GTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTGGCCGCAAGATTTA---CAACGCC 125792 ||| || || ||||| || || |||| |||| ||||| || |||| | Sbjct 304315 GTTCGTTGCTGATCGGCTGTTG-----GTTGCTCTTGGAAACAAGAAGTACTTCAACTCT 304261 Query 125793 AAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAG 125852 || ||||| || |||||| || || || || | || ||||| ||||| || ||| Sbjct 304260 CCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGAG 304201 Query 125853 AAG 125855 ||| Sbjct 304200 AAG 304198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741056411764760