Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13] 301 sequences; 28,526,023 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq187 125 1e-23 seq279 100 6e-16 >seq187 Length=590751 Score = 125 bits (138), Expect = 1e-23 Identities = 298/440 (68%), Gaps = 24/440 (5%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | ||| || | || ||||| |||||||||||||||||||| | Sbjct 304202 TCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTTTCCATGAAGTCGAAGGGGTTGGGA 304261 Query 251623 GCATTG---TACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCC 251679 | ||| |||| |||| | ||||| || || || | || || || || ||||| Sbjct 304262 GAGTTGAAGTACTTCTTG---TTTCCAAGAGCAACCAACAGCCGATCAGCAACGAACTCA 304318 Query 251680 AGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAG 251739 | |||||| | ||| || | |||||||||||| | | | | ||||| || || Sbjct 304319 ATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGAGCAACAGGAAGAGCGTCTGTC 304378 Query 251740 ATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCA 251794 | ||| |||| ||| |||| || ||||| | | ||| ||| | |||| || | Sbjct 304379 AAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATATCCTCAATAACCTTCTTGTCG 304438 Query 251795 GAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGC---CAAACTGTTGGTGCAGAC 251851 | | | || | || || |||| | || || || |||| | | |||||| | Sbjct 304439 GGGCGA---TGGT-TCAAG---TGAGAAAAG-AGAAGGCAAGCAAAGTCTGTGTGCAGTC 304490 Query 251852 CCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCC 251911 ||||||| ||| ||||| ||||||||| | | || |||||||||| ||||| ||| Sbjct 304491 CCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAAGCCACGCTTCT 304550 Query 251912 TGAGCCAGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCAT 251970 | ||||||||||| | |||||| ||||||||||| | | ||||| ||| | | Sbjct 304551 TCAGCCAGAAGATGGAAGCAAAA-GATCCAGAGAAAAAGATTCCCTCCACAGCGGCGAAG 304609 Query 251971 GCAACAAGGCGCTCAGCAAA 251990 || |||||||||| ||| || Sbjct 304610 GCCACAAGGCGCTGAGCGAA 304629 >seq279 Length=562116 Score = 100 bits (110), Expect = 6e-16 Identities = 172/244 (70%), Gaps = 12/244 (5%) Strand=Plus/Minus Query 280649 CAAGAATGTTGAGGACCA-TATGACCAAGCTGGGTCTGGACCCCGA----GTTTACAACT 280703 |||| | |||||| ||| | || |||| | ||||| || |||| |||| || Sbjct 307987 CAAGGAGATTGAGGCCCACTGTG-CCAACTTCGGTCTCGATGCCGAACTCGTTT----CT 307933 Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 |||||||| || |||||||| || || || ||| ||||| | ||| ||| || || Sbjct 307932 CACTCTCGTATGCGCGGTCTGTCCGGTGGTCAGCGTGTCAAGGTCGTCCTCGCCGCCTGC 307873 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | |||||||| ||||| ||||||||||| ||||||||||| ||||| || Sbjct 307872 TC-GTGGCAGCGTCCTCACGTCATCGTCCTCGACGAGCCCACCAACTATCTCGACCGTGA 307814 Query 280823 GAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACATTTGGCGGCGGCGTCGTAGTCATTTC 280882 ||||| || ||| ||||| | || || | || || ||||| ||||| | Sbjct 307813 CTCTCTGGGTGCCCTGTCCAAGGCTCTCAAGACTTTCGAGGGTGGTGTCGTTATCATTAC 307754 Query 280883 TCAC 280886 ||| Sbjct 307753 CCAC 307750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027832836083141