Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13]
301 sequences; 28,526,023 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq206 136 9e-27
seq193 111 4e-19
seq202 89.7 1e-12
>seq206
Length=187621
Score = 136 bits (150), Expect = 9e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || || | || || || || | |||||| || ||||| ||||| || ||||
Sbjct 91554 TCCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGA 91613
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
||| || | || ||||| || || || || |||||||| |||||||| || | ||
Sbjct 91614 GAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGG 91673
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTA 288424
||| || || || || ||||| || ||| |||||||| || || | ||| || || |
Sbjct 91674 GATGCCCTCCTTGTCTTGGATCTT-GCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCA 91732
Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || || || ||||| ||||| |||||||||||||| ||||||||
Sbjct 91733 CCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 91781
Score = 131 bits (144), Expect = 4e-25
Identities = 159/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| ||||| || | || ||| || || || ||||||||||
Sbjct 92011 CCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGAC 92070
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| || || || || || || || ||||| ||||||||||| || | |||
Sbjct 92071 AAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGG 92130
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| |||| || ||||| || || | |||||| ||||| ||
Sbjct 92131 ATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCACC 92190
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
||||| || || ||||| || || || ||||||||||
Sbjct 92191 TCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGA 92227
Score = 125 bits (138), Expect = 2e-23
Identities = 170/233 (73%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| || || | || || ||||| | ||| ||| ||||||||||| || |
Sbjct 91779 CATG-CCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAAT 91837
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | | || || || ||||| | ||| ||||| || ||||| |||||||||||| |
Sbjct 91838 CAGACAAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAG 91897
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGAT 288420
||||| || || ||||||||||| || ||| || || || || || | || ||
Sbjct 91898 GAGGGATACCCTCCTTATCCTGGATCTT-GCTCTTGACATTGTCGATGGTGTCTGAAGAC 91956
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||||||| | ||||| ||||| || || |||||||| ||||| || |||||
Sbjct 91957 TCTACTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 92009
Score = 118 bits (130), Expect = 3e-21
Identities = 166/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| || || | || || || || | || ||| || ||||| ||||| |
Sbjct 92315 CATG-CCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAAT 92373
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || ||||| || || || | || || || ||||| |||| ||||| || |
Sbjct 92374 CGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAG 92433
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||||| || || |||||||| || |||| || || || || |||| ||||| || |
Sbjct 92434 GAGGGATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACT 92493
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || | ||||| ||||| || || |||||||||||||| ||||||||
Sbjct 92494 CGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 92545
>seq193
Length=151949
Score = 111 bits (122), Expect = 4e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| || || || |||||| || ||||| || || || | || || || |||||||||
Sbjct 94806 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 94865
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| ||||| || | ||||| || || || |||||||| || || || ||||| ||
Sbjct 94866 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 94925
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | |||||||| || || ||||| || || ||||| || ||||| |||||||||||
Sbjct 94926 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 94984
>seq202
Length=135099
Score = 89.7 bits (98), Expect = 1e-12
Identities = 245/367 (67%), Gaps = 10/367 (3%)
Strand=Plus/Plus
Query 325967 ATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAAC--AGC 326024
||||| |||||||||| ||| |||| | || || | || ||| | |||||| |||
Sbjct 34773 ATAGGAGTGATGAACTCGATCAGGAACTCCGGGATCTTCAGCAGACT-GGGAAATTGAGC 34831
Query 326025 TATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 326084
|| | ||||| |||| | || || ||| | |||||| |||| |||||||
Sbjct 34832 C-TGAAGGAAGTTGATGAGCAAGCCCTTGATATGACTGCCGTCATGATCCTGATCGGTCA 34890
Query 326085 TGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAA 326144
||||||||| ||||||||| || ||| | || || |||| | || | || |
Sbjct 34891 TGATCATCAAATGACCGTAGCGCAGCCCGCGGGTATCGGTGTATTCCTTCTTGTGCTGTA 34950
Query 326145 GGCCGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGA--TGCTTGCCACGGA 326202
|||| || | | |||| | |||||| | |||||||| | |||| | | ||
Sbjct 34951 GGCCAAGGAAGTTCTTGATATTTTGGATTTCCTGGTTCTTCGAAATCTGCT--CAAAAGA 35008
Query 326203 TGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACC 326262
||||||||||| || | | |||||| || | ||||| || || | ||| | ||
Sbjct 35009 GGCATCGCGGACATTGAGCAATTTTCCTCGCAAGGGGAAGACACCGAAAAGGTCGGGTCC 35068
Query 326263 GACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGTCAGAATGA 326321
||| |||| |||| || || ||||| | | | || || || || || |||| |||||
Sbjct 35069 GACGACGGCTCGCCCAGCCATGGCAAG-GCCTTTAGCCGAGTCACCTTCGGTCAAAATGA 35127
Query 326322 GAGTGCA 326328
| |||||
Sbjct 35128 GGGTGCA 35134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179649850589078
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |