Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13] 301 sequences; 28,526,023 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq202 95.1 3e-14 seq295 87.8 4e-12 >seq202 Length=135099 Score = 95.1 bits (104), Expect = 3e-14 Identities = 246/367 (67%), Gaps = 10/367 (3%) Strand=Plus/Plus Query 298088 ATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAAC--AGC 298145 ||||| |||||||||| ||| |||| | || || | || ||| | |||||| ||| Sbjct 34773 ATAGGAGTGATGAACTCGATCAGGAACTCCGGGATCTTCAGCAGACT-GGGAAATTGAGC 34831 Query 298146 TATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 298205 || | ||||| |||| | || || ||| | |||||| |||| ||||||| Sbjct 34832 C-TGAAGGAAGTTGATGAGCAAGCCCTTGATATGACTGCCGTCATGATCCTGATCGGTCA 34890 Query 298206 TGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAA 298265 ||||||||| ||||||||| || ||| | || || |||| | || | || | Sbjct 34891 TGATCATCAAATGACCGTAGCGCAGCCCGCGGGTATCGGTGTATTCCTTCTTGTGCTGTA 34950 Query 298266 GGCCGAGAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGA--TGCTTGCCACGGA 298323 |||| || | | |||| | |||||| | |||||||| | |||| | | || Sbjct 34951 GGCCAAGGAAGTTCTTGATATTTTGGATTTCCTGGTTCTTCGAAATCTGCT--CAAAAGA 35008 Query 298324 TGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACC 298383 |||||||||||||| | | |||||| || | ||||| || || | ||| | || Sbjct 35009 GGCATCGCGGACATTGAGCAATTTTCCTCGCAAGGGGAAGACACCGAAAAGGTCGGGTCC 35068 Query 298384 GACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGTCAGAATGA 298442 ||| |||| |||| || || ||||| | | | || || || || || |||| ||||| Sbjct 35069 GACGACGGCTCGCCCAGCCATGGCAAG-GCCTTTAGCCGAGTCACCTTCGGTCAAAATGA 35127 Query 298443 GAGTGCA 298449 | ||||| Sbjct 35128 GGGTGCA 35134 >seq295 Length=162266 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 330459 CTTTGCAATATCTGTTCCACTCCCCATGGCACATCCAACGTCTGCCTCCTTAAGAGCCGG 330518 ||| |||| ||| |||||| | ||||||||| |||| ||| |||| ||| | ||| || Sbjct 32925 CTTAGCAACATCCGTTCCAGTACCCATGGCAACACCAATGTCGGCCTTCTTCAAAGCAGG 32866 Query 330519 AGCATCGTTAGCACCATCGCCACTCGATGCAACGACATGACCAAGA 330564 ||||||||| |||| |||||| || |||||| ||||| || ||| Sbjct 32865 AGCATCGTTGACACCGTCGCCAGTCATTGCAACCACATGGCCCAGA 32820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875746674350