Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13] 301 sequences; 28,526,023 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq187 161 1e-34 seq193 95.1 1e-14 >seq187 Length=590751 Score = 161 bits (178), Expect = 1e-34 Identities = 309/450 (69%), Gaps = 19/450 (4%) Strand=Plus/Minus Query 52396 AGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCA 52455 ||||| | |||||||||||| || ||||| | ||||| || || ||||| ||| Sbjct 304622 AGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCA 304563 Query 52456 TCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATAT 52515 |||| | | || | | ||| | ||||| || || || ||| ||||||| | || | Sbjct 304562 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCT 304503 Query 52516 CGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCG 52575 | || ||||| ||||||||||| |||||||| ||||| || | | | ||| | Sbjct 304502 CTCGTGACGAGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTT---CTCACTTGAACC 304446 Query 52576 AAAAATTGGATTCGGACACGA----TCCTGAGCATGTTCAAG--GAGGCGGTGGCTATCG 52629 | | | || ||| || | |||| || || | ||||| ||||| || | Sbjct 304445 A-----TCGCCCCG-ACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTG 304392 Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCA 52689 || ||||||| || || | ||| || || || | || |||||||||||| | || | Sbjct 304391 AACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAA 304332 Query 52690 TGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA--AA 52747 ||||| |||| || ||||| || || ||||| |||||||| |||| | | || || Sbjct 304331 TGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGT--TGCTCTTGGAAACAAGAA 304274 Query 52748 GTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGAC 52807 |||||||||| ||| ||| || || || || ||| | | || ||||||| || ||||| Sbjct 304273 GTACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGAC 304214 Query 52808 CAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||| || |||||||| || || || || Sbjct 304213 GAACTTCTTTGAGAAGCGTGTTGGTGACTA 304184 >seq193 Length=151949 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| ||||||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 94804 CCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 94863 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | || ||||| ||||| || || ||||| || ||||| ||| || || | | | Sbjct 94864 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 94923 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||||| ||||||| || |||| || | || ||||| ||||| || || || | Sbjct 94924 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 94983 Query 138605 AA 138606 || Sbjct 94984 AA 94985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260532812720