Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13] 301 sequences; 28,526,023 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq239 107 2e-17 >seq239 Length=233174 Score = 107 bits (118), Expect = 2e-17 Identities = 354/547 (65%), Gaps = 4/547 (1%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||| | ||||| || || || ||||| || ||||| ||||| | | ||| Sbjct 136658 GCTGTCGGTATTGACTTGGGTACCACCTACTCCTGTGTGGGTGTCTTCAGAGATGACCGC 136717 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||||| |||||||| || || |||||| | |||||||| || | || ||||||| Sbjct 136718 ATTGAAATCATTGCCAACGACCAGGGTAACCGTACTACTCCCTCGTTCGTGGCTTTCACC 136777 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || | | | | |||||||| || || |||| | | | || ||| ||| Sbjct 136778 GACACCGAGCGTCTCATCGGTGATGCCGCCAAGAATCAGGTCGCCATGAACCCTCACAAC 136837 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || |||| |||||||| ||| | || || | | || | ||| | |||||| | Sbjct 136838 ACCGTTTTCGATGCTAAGCGTCTGATCGGTCGTCGGTTCCAAGATGCTGAGGTTCAGTCT 136897 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 ||||||||||| ||||||||| | |||| | || || || ||||| | | Sbjct 136898 GATATGAAGCACTGGCCTTTCAAGGTTGTCGAGAAGGGCGGCAAGCCCATCATTGAGGTT 136957 Query 550292 -ACTCATGAAGGATCTG-TTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349 | | | |||| | || || || | || ||| | || || || ||||| | | Sbjct 136958 GAGT--TCAAGGGCGAGACCAAGCAGTTCACCCCTGAAGAGATCTCCTCCATGGTCCTGA 137015 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409 || ||| | || || || | | ||| || | | || || || | Sbjct 137016 CCAAGATGCGTGAGACCGCTGAAGCCTACCTCGGTGGCACTGTCAACAACGCTGTCATCA 137075 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 | || || || || || || ||||| || ||||| || ||||| |||||||| | || | Sbjct 137076 CCGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACTAAGGATGCTGGTCTCATCG 137135 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 | || || || || || ||||| ||||| || |||||||| ||||| |||| || || | Sbjct 137136 CCGGCCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTACGGTC 137195 Query 550530 TTGATAA 550536 |||| || Sbjct 137196 TTGACAA 137202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029280081762490