Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13] 301 sequences; 28,526,023 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq190 131 2e-25 >seq190 Length=182193 Score = 131 bits (144), Expect = 2e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 75876 TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGG 75935 ||||| | |||||||| | | ||||| |||||||| | || | |||||||||||||| Sbjct 96383 TTTGGTATGCTATTCTTGAGGCTCAGACCGAGACTGGCAACCCCTTTATGCTTTACAAGG 96442 Query 75936 ATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTT 75995 |||| || ||||||||||| ||||| ||||| ||||||| || ||||| ||||||| Sbjct 96443 ATGCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGAACTATTCGCAGCTCCAATCTTT 96502 Query 75996 GCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAA 76055 ||||||| || | ||||||| | | || || ||||| ||||| |||| || Sbjct 96503 GCACGGAGATCATTGAGTACAGTGCTCCTGACGAAGTTGCTGTCTGCAACCTGGCTTCTC 96562 Query 76056 TCGCCCTTCC 76065 |||| ||||| Sbjct 96563 TCGCGCTTCC 96572 Score = 89.7 bits (98), Expect = 6e-13 Identities = 402/633 (64%), Gaps = 8/633 (1%) Strand=Plus/Plus Query 76304 ATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAA 76363 |||||||| ||||| ||||||| | || || |||||| |||| | | Sbjct 96811 ATCTTTGAGACCATCTATCACGGTGCTTTGACTGCATCTTGTGAGCTGGCCAAGGAGTTT 96870 Query 76364 GGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATG 76423 ||| | ||||| || | ||||| || |||| || || || | || |||| ||||||| Sbjct 96871 GGTCCTTATGAAACTTACGAGGGCTCCCCCGTCTCTCAGGGTATTCTCCAGTATGATATG 96930 Query 76424 TGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAG 76483 ||||| | ||| | | || ||||||||| ||| |||| || || Sbjct 96931 TGGGACAGAACCCCCACGGACCTCTGGGACTGGGATTCTCTGAAGGCGAAGATTGCCCAG 96990 Query 76484 AAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATC 76543 | ||| ||||||||||| | ||| ||||||| ||||| || || |||| || || Sbjct 96991 CACGGTGTTCGTAACAGTTTGTTGGTGGCACCGATGCCCACCGCAAGCACCAGCCAGATT 97050 Query 76544 TTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTC 76603 |||| || ||||| ||||| || ||||| | ||||||||| | | || Sbjct 97051 CTGGGCTTCAACGAATGTTTTGAGCCTTACACCTCGAACATCTACTCTCGCCGTGTTCTT 97110 Query 76604 GCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTC 76663 || |||||||| | || ||| || |||| || || | ||||||| Sbjct 97111 GCTGGTGAGTTCCAGGTCGTTAACCCTTGGCTTCTCAAGGATCTTGTCGACCTTGGTCTG 97170 Query 76664 TGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCA 76723 ||||| | | ||||| | | || | || ||||| ||| ||||||| || | Sbjct 97171 TGGTCGGACAACATGAAAAACCGTATCATCGCAGATGGTGGCTCCGTTCAAAACATTCCC 97230 Query 76724 GATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAG 76781 | || || | || |||||| ||||||| || |||||||||| || | | | Sbjct 97231 AACATTCCCGCCGACATCAAGGCTCTCTACAAGACCGTGTGGGAAATCTCCCAACGTACC 97290 Query 76782 ATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATC 76841 | || | | |||||||| || |||||| |||||||| || |||| | | || Sbjct 97291 A--TCCTGCAGATGGCCGCCGACCGTGGTGCTTTCATTGACCAGTCTCAATCTCTCAA-- 97346 Query 76842 TATTCA--TGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAA 76899 ||||| || | || || ||| ||||||| | |||||| | | |||||| Sbjct 97347 CATTCACCTGAAGGAGCCTACTATGGGCAAGCTCACCAGTATGCACTTTGCTGGGTGGAA 97406 Query 76900 ACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | ||| | || || ||||||||||| || || Sbjct 97407 AATGGGTTTGAAGACTGGAATGTACTACCTGCG 97439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596567355406880