Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13] 301 sequences; 28,526,023 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq239 127 2e-23 seq228 113 6e-19 seq190 104 3e-16 seq187 86.0 8e-11 >seq239 Length=233174 Score = 127 bits (140), Expect = 2e-23 Identities = 111/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 || |||||||||||||| || || |||||| |||||||| || | ||||| |||||| Sbjct 16435 GATAGCATCGGCGGCACCGTCACCTGCGTGATCCGCAACGTCCCCGTCGGCCTGGGCGAG 16376 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| ||| || ||||||||||| ||||| |||||| Sbjct 16375 CCTTGCTTCGACAAGCTCGAGGCCAAGCTGGCGCACGCCATGCTCAGCATCCCCGCCACC 16316 Query 19167 AAGGGATTCGAGATTGGC 19184 ||||| || ||||| ||| Sbjct 16315 AAGGGCTTTGAGATCGGC 16298 >seq228 Length=689136 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||| ||||| ||||| |||| | ||| | || |||||| |||| || ||| Sbjct 264107 GCTGCCAACTATCTCGATATCAAAGCTCTCTTGGATGTCGGCTGCAAGACTGTTGCGAAC 264166 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| ||||| ||||| ||||||||||| ||||| || ||| Sbjct 264167 ATGATCAAGGGCAAGTCCCCCGAAGAGATTCGCAAGACCTTCAACATTCAGAACG 264221 >seq190 Length=182193 Score = 104 bits (114), Expect = 3e-16 Identities = 203/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||| || | || |||| ||| || ||||| |||||||| || | ||||| || Sbjct 96027 CTGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGA 95968 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 || || ||||| | | ||||| ||| | ||| || | ||| || || ||| Sbjct 95967 GGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCC 95908 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| ||||| || | ||| ||||| | || || || || ||||||||||| ||||| Sbjct 95907 GATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTC 95848 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || ||||||| || ||||| ||||| |||| || || || | || || Sbjct 95847 AATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACC 95788 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 || ||||| || || || | || ||||| | | | | |||||| || |||||| Sbjct 95787 AGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGT 95728 >seq187 Length=590751 Score = 86.0 bits (94), Expect = 8e-11 Identities = 164/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| ||| || ||||| ||||| || | |||||||| Sbjct 304175 GCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATA 304234 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||| | ||| |||||||| | ||| ||| ||| | | ||| || | | Sbjct 304235 CTTTCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACC 304294 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 | ||| || || || || ||||| || ||||||||||| || | ||||||||| | | Sbjct 304295 AACAGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGG 304354 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || || | || ||| ||||| | || || | || ||||| ||||| Sbjct 304355 AGAGCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATA 304414 Query 868931 AT 868932 || Sbjct 304415 AT 304416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107114498530417