Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13]
301 sequences; 28,526,023 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq239 127 2e-23
seq228 113 6e-19
seq190 104 3e-16
seq187 86.0 8e-11
>seq239
Length=233174
Score = 127 bits (140), Expect = 2e-23
Identities = 111/138 (80%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
|| |||||||||||||| || || |||||| |||||||| || | ||||| ||||||
Sbjct 16435 GATAGCATCGGCGGCACCGTCACCTGCGTGATCCGCAACGTCCCCGTCGGCCTGGGCGAG 16376
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| |||||| |||||||| ||| || ||||||||||| ||||| ||||||
Sbjct 16375 CCTTGCTTCGACAAGCTCGAGGCCAAGCTGGCGCACGCCATGCTCAGCATCCCCGCCACC 16316
Query 19167 AAGGGATTCGAGATTGGC 19184
||||| || ||||| |||
Sbjct 16315 AAGGGCTTTGAGATCGGC 16298
>seq228
Length=689136
Score = 113 bits (124), Expect = 6e-19
Identities = 94/115 (82%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| |||||||| ||||| ||||| |||| | ||| | || |||||| |||| || |||
Sbjct 264107 GCTGCCAACTATCTCGATATCAAAGCTCTCTTGGATGTCGGCTGCAAGACTGTTGCGAAC 264166
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||||||||||||| ||||| ||||| ||||||||||| ||||| || |||
Sbjct 264167 ATGATCAAGGGCAAGTCCCCCGAAGAGATTCGCAAGACCTTCAACATTCAGAACG 264221
>seq190
Length=182193
Score = 104 bits (114), Expect = 3e-16
Identities = 203/300 (68%), Gaps = 0/300 (0%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
||||||||| || | || |||| ||| || ||||| |||||||| || | ||||| ||
Sbjct 96027 CTGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGA 95968
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|| || ||||| | | ||||| ||| | ||| || | ||| || || |||
Sbjct 95967 GGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCC 95908
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| ||||| || | ||| ||||| | || || || || ||||||||||| |||||
Sbjct 95907 GATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTC 95848
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| || ||||||| || ||||| ||||| |||| || || || | || ||
Sbjct 95847 AATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACC 95788
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364
|| ||||| || || || | || ||||| | | | | |||||| || ||||||
Sbjct 95787 AGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGT 95728
>seq187
Length=590751
Score = 86.0 bits (94), Expect = 8e-11
Identities = 164/242 (68%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| ||| || ||||| ||||| || | ||||||||
Sbjct 304175 GCCTTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATA 304234
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||| | ||| |||||||| | ||| ||| ||| | | ||| || | |
Sbjct 304235 CTTTCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACC 304294
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
| ||| || || || || ||||| || ||||||||||| || | ||||||||| | |
Sbjct 304295 AACAGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGG 304354
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || || | || ||| ||||| | || || | || ||||| |||||
Sbjct 304355 AGAGCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATA 304414
Query 868931 AT 868932
||
Sbjct 304415 AT 304416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107114498530417
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |