Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13]
301 sequences; 28,526,023 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq239 86.0 5e-11
>seq239
Length=233174
Score = 86.0 bits (94), Expect = 5e-11
Identities = 211/320 (66%), Gaps = 0/320 (0%)
Strand=Plus/Minus
Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 282211
||||||||||| || | |||| | | |||||||| || || || || ||||| |||
Sbjct 137385 TTTCTCTTGAATTCATTAACAAAGTGGTTAACAAGACGGTTGTCGAAGTCCTCACCACCC 137326
Query 282212 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 282271
| | ||| | || | ||||| | || | ||| | || || |||| | || ||
Sbjct 137325 AGGTGAGTGTCACCAGCGGTAGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAGGAGG 137266
Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331
| |||||| || |||||||| | ||| || || || || || || ||
Sbjct 137265 GAAACATCGAAAGTACCACCACCAAGATCGAAGATCAGGACGTTACGCTCGCCCTCGGCC 137206
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
|| || |||||||| || |||| ||||| ||||| || || || || || | | ||
Sbjct 137205 TTCTTGTCAAGACCGTAGGCAATGGCAGCGGCAGTAGGCTCGTTGATGATACGGAGGACG 137146
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| || || || || || ||||| |||||||| || | || || ||||| || ||
Sbjct 137145 TTCAGGCCGGCGATGAGACCAGCATCCTTAGTGGCCTGACGCTGAGAGTCGTTGAAGTAG 137086
Query 282452 GCAGGAACAGTAATAACGGC 282471
|| || || || || || ||
Sbjct 137085 GCGGGGACGGTGATGACAGC 137066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740615622172026
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |