Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13] 301 sequences; 28,526,023 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq190 176 6e-39 seq187 104 3e-17 >seq190 Length=182193 Score = 176 bits (194), Expect = 6e-39 Identities = 473/722 (66%), Gaps = 6/722 (1%) Strand=Plus/Minus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || || ||||| || ||||||| |||| ||||| |||||| || || | || | | Sbjct 96266 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 96207 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || || | | || |||||| ||||| || ||||| || |||| || || || Sbjct 96206 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 96147 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | || ||| ||| || || || || || |||||| || ||||| | Sbjct 96146 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 96087 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 ||||| | |||||| || || || || || || | | || || || || || |||||| Sbjct 96086 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 96027 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | || || |||||||| || | || | ||||| |||| |||||| ||||| Sbjct 96026 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 95967 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 ||||| || ||| ||| || ||| | || || || || || || Sbjct 95966 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 95907 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || || | || ||||| | |||||| || | ||||| || |||||||| Sbjct 95906 ATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCA 95847 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGAC---ATTTGATGATGTATAGTT 69993 |||||||| || |||| | | || || || |||| | || | || ||| Sbjct 95846 ATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGTA 95790 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || ||||| || | |||||||| || |||||||| |||| | ||| | || | ||| Sbjct 95789 CCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAG 95730 Query 70054 GTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATA 70113 || ||||| || ||| |||| |||||| || | ||| ||||||||||||| Sbjct 95729 GTCTCAATGGCCTTTTCAATATTGTTGCCATGAATGCCAACCGCAACACGCATCAACAAG 95670 Query 70114 TGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTT 70173 ||||| || || || | || ||| ||| || |||||| || || || || Sbjct 95669 TGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTGTC 95610 Query 70174 TTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTA 70233 || || || ||| ||||||| ||||| | || || | |||| |||| || || | | Sbjct 95609 TTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGCTCA 95550 Query 70234 TC 70235 || Sbjct 95549 TC 95548 >seq187 Length=590751 Score = 104 bits (114), Expect = 3e-17 Identities = 335/515 (65%), Gaps = 9/515 (2%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || ||||| |||||||| || ||||| || || || || || ||| | | || ||| || Sbjct 304178 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTT 304237 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || || || || | | || | | || || ||| | | | | Sbjct 304238 TCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACCAAC 304297 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | | ||| ||||| || || || || ||| | | | | ||||| || | ||| Sbjct 304298 AGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGA 304357 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCT--GTTATTA 39563 ||| || ||||| || || | ||||| | ||| ||| | || ||||| | || || Sbjct 304358 GCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATA 304417 Query 39564 TCGATGTTACTACCTCATCACTCGGTG-GATGCAATAAATGTTTAAACATTAAGCAGGCG 39622 || || |||| | |||| | |||| || || ||| | | ||| || Sbjct 304418 TCCTCAATA--ACCTTCTTG-TCGGGGCGATGGTTCAAGTGAGAAAAGAGAAGGCAAGCA 304474 Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682 ||||| || || ||||| || | | || | ||||| || || ||||| |||||| Sbjct 304475 AAGTCTGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGC 304534 Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742 || | |||||||| || ||||| || |||| ||||||||||||||| || ||||| || Sbjct 304535 ATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCC 304594 Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTAT---GTATCCAC 39799 || || || || || || ||||| | || || || | | || |||| ||||| Sbjct 304595 TCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGAAATCCAT 304654 Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGG 39834 || ||||| | || |||||| | | |||||| Sbjct 304655 CTCATGGCCCACTGGGCCTTCTTCCTGATACAAGG 304689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906215505640