Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13]
301 sequences; 28,526,023 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq190 233 3e-56
seq187 111 2e-19
>seq190
Length=182193
Score = 233 bits (258), Expect = 3e-56
Identities = 597/901 (66%), Gaps = 16/901 (2%)
Strand=Plus/Minus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
||||| ||||| || ||||||| |||||||||| |||||| || || | || | |
Sbjct 96266 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 96207
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| ||||| | || ||| || ||||| || |||||||| |||| || || ||
Sbjct 96206 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 96147
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
||||| |||| ||| ||| || || || ||||| |||||| |||||||| |
Sbjct 96146 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 96087
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
||||| | |||||| || || || || || || | | | || || || || |||||||||
Sbjct 96086 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 96027
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
|| || | ||| || |||||||| || | || | | ||| |||| ||| ||||||||
Sbjct 96026 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 95967
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
| ||||| || ||| ||| || || ||||| || || |||||
Sbjct 95966 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 95907
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939
|| || || || | || ||||| | ||||| || | ||||| ||||| |||||
Sbjct 95906 ATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCA 95847
Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGAC---ATTTGATGATGAACAGTT 76996
|| ||||| ||| |||| | | || | ||| |||| | || | || |||
Sbjct 95846 ATGCTATCCTCCTTCATATCGACGAGGA---AGCAAGACGCAAGCTGGGGTTGGGGAGTA 95790
Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056
|| ||||| |||| |||||||| ||||||||||| |||| | ||| | || | |||
Sbjct 95789 CCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAG 95730
Query 77057 GTTTCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAACA 77114
|| ||||| | ||| |||| ||| |||||| || || || |||||||||||||
Sbjct 95729 GTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAACA 95672
Query 77115 TATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAG 77174
||||| || || || || ||| ||| ||| || || ||| || || | |
Sbjct 95671 AGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTG 95612
Query 77175 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTT 77234
| || ||||| ||| ||||||| ||||| | || || | |||| | || || || |
Sbjct 95611 TCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGCT 95552
Query 77235 TGTCCTTATATTTGGTAACAATATC-CATGACAGTGGTAGAAATAATTGGAGATCGTATT 77293
|| || ||| | ||||| || | | | | | ||||| ||||| | || ||
Sbjct 95551 CATCAGCATGTTTCATGACAATTTCATACGTCTCT-TTCGAAATCATTGGCG--CGGGTT 95495
Query 77294 CC--ATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttttt 77351
| ||||| || |||||||||| | | ||| || || || | || |
Sbjct 95494 GCTTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCT 95435
Query 77352 ttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGAT 77411
| |||| |||||| || || || |||||||| | ||||||| || ||||| || || |
Sbjct 95434 TGGTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGT 95375
Query 77412 G 77412
|
Sbjct 95374 G 95374
>seq187
Length=590751
Score = 111 bits (122), Expect = 2e-19
Identities = 179/257 (70%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986
|| ||||||||||| ||||| ||||| || ||||| || |||| || |||| | |
Sbjct 304821 TCCGAATGAATGTTCTCAATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGCACC 304880
Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046
|| ||||| | | || || || |||| |||||||| || ||||| ||| |||||
Sbjct 304881 TGCACCTCATTGCTGAAGCGCTCCAACAAGTTCTCATTAACGATTCCGTCAGAGGCAGCG 304940
Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAG 47103
|| || || | ||||| || ||||| |||||| | ||| | || ||||||
Sbjct 304941 AAGAAGGCAAGGACATGAGAGATGAAATAACGCTCATCGTCATTCAGACGGTTGTTCCAG 305000
Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163
|| | | |||||| || | ||| | || || || |||||||| || || || |||||
Sbjct 305001 TCGTGCAGATCTTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCTTTC 305060
Query 47164 TTATACATATTCCATAT 47180
|| ||||| | ||| ||
Sbjct 305061 TTGTACATTTGCCAAAT 305077
Score = 109 bits (120), Expect = 8e-19
Identities = 334/514 (65%), Gaps = 7/514 (1%)
Strand=Plus/Plus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|| ||||| ||||| ||||| ||||| || || || || || ||| | | || ||| ||
Sbjct 304178 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTT 304237
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| || || || || || | | || | || || ||| | | | |
Sbjct 304238 TCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACCAAC 304297
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
|| | ||| |||||||| || |||||| ||| | | | | ||||| || | |||
Sbjct 304298 AGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGA 304357
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATC--CGATATTA 46576
|| || ||||| || || | ||||| |||||||| | ||||| || ||||| ||
Sbjct 304358 GCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATA 304417
Query 46577 TCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636
|| || || || || |||| |||| || ||| | | || ||||
Sbjct 304418 TCCTCAATAACCTT--CTTGTCGGGGCGATGGTTCAAGTGAGAAAAGAGAAGGCAAGCAA 304475
Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696
| || || || || || || | | || | ||||| || || ||||| |||||||
Sbjct 304476 AGTCTGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCA 304535
Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756
| | |||||||| || ||||| || || | || ||||||||||| || || || || |
Sbjct 304536 TCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCCT 304595
Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACC 46813
| ||||| ||||| || ||||| | || || || | | || |||| |||||| |
Sbjct 304596 CCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGAAATCCATC 304655
Query 46814 TTTGAGCCCAATCAGCCTTTTTCTTTACACAAGG 46847
| ||||| | ||||| ||| | | ||||||
Sbjct 304656 TCATGGCCCACTGGGCCTTCTTCCTGATACAAGG 304689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712931717584320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |