Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643665.1_202016-05-13] 301 sequences; 28,526,023 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq190 233 3e-56 seq187 111 2e-19 >seq190 Length=182193 Score = 233 bits (258), Expect = 3e-56 Identities = 597/901 (66%), Gaps = 16/901 (2%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| ||||| || ||||||| |||||||||| |||||| || || | || | | Sbjct 96266 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 96207 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || ||||| | || ||| || ||||| || |||||||| |||| || || || Sbjct 96206 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 96147 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| |||| ||| ||| || || || ||||| |||||| |||||||| | Sbjct 96146 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 96087 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 ||||| | |||||| || || || || || || | | | || || || || ||||||||| Sbjct 96086 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 96027 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | ||| || |||||||| || | || | | ||| |||| ||| |||||||| Sbjct 96026 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 95967 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | ||||| || ||| ||| || || ||||| || || ||||| Sbjct 95966 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 95907 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || ||||| | ||||| || | ||||| ||||| ||||| Sbjct 95906 ATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCA 95847 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGAC---ATTTGATGATGAACAGTT 76996 || ||||| ||| |||| | | || | ||| |||| | || | || ||| Sbjct 95846 ATGCTATCCTCCTTCATATCGACGAGGA---AGCAAGACGCAAGCTGGGGTTGGGGAGTA 95790 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056 || ||||| |||| |||||||| ||||||||||| |||| | ||| | || | ||| Sbjct 95789 CCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAG 95730 Query 77057 GTTTCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAACA 77114 || ||||| | ||| |||| ||| |||||| || || || ||||||||||||| Sbjct 95729 GTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAACA 95672 Query 77115 TATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAG 77174 ||||| || || || || ||| ||| ||| || || ||| || || | | Sbjct 95671 AGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTG 95612 Query 77175 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTT 77234 | || ||||| ||| ||||||| ||||| | || || | |||| | || || || | Sbjct 95611 TCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGCT 95552 Query 77235 TGTCCTTATATTTGGTAACAATATC-CATGACAGTGGTAGAAATAATTGGAGATCGTATT 77293 || || ||| | ||||| || | | | | | ||||| ||||| | || || Sbjct 95551 CATCAGCATGTTTCATGACAATTTCATACGTCTCT-TTCGAAATCATTGGCG--CGGGTT 95495 Query 77294 CC--ATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttttt 77351 | ||||| || |||||||||| | | ||| || || || | || | Sbjct 95494 GCTTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCT 95435 Query 77352 ttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGAT 77411 | |||| |||||| || || || |||||||| | ||||||| || ||||| || || | Sbjct 95434 TGGTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGT 95375 Query 77412 G 77412 | Sbjct 95374 G 95374 >seq187 Length=590751 Score = 111 bits (122), Expect = 2e-19 Identities = 179/257 (70%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 || ||||||||||| ||||| ||||| || ||||| || |||| || |||| | | Sbjct 304821 TCCGAATGAATGTTCTCAATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCAGGCACC 304880 Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046 || ||||| | | || || || |||| |||||||| || ||||| ||| ||||| Sbjct 304881 TGCACCTCATTGCTGAAGCGCTCCAACAAGTTCTCATTAACGATTCCGTCAGAGGCAGCG 304940 Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCA---GTTTATTCCAG 47103 || || || | ||||| || ||||| |||||| | ||| | || |||||| Sbjct 304941 AAGAAGGCAAGGACATGAGAGATGAAATAACGCTCATCGTCATTCAGACGGTTGTTCCAG 305000 Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163 || | | |||||| || | ||| | || || || |||||||| || || || ||||| Sbjct 305001 TCGTGCAGATCTTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCTTCGGCTTTC 305060 Query 47164 TTATACATATTCCATAT 47180 || ||||| | ||| || Sbjct 305061 TTGTACATTTGCCAAAT 305077 Score = 109 bits (120), Expect = 8e-19 Identities = 334/514 (65%), Gaps = 7/514 (1%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 || ||||| ||||| ||||| ||||| || || || || || ||| | | || ||| || Sbjct 304178 TTCTGGTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTT 304237 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || || || || || | | || | || || ||| | | | | Sbjct 304238 TCCATGAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACCAAC 304297 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | ||| |||||||| || |||||| ||| | | | | ||||| || | ||| Sbjct 304298 AGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGA 304357 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATC--CGATATTA 46576 || || ||||| || || | ||||| |||||||| | ||||| || ||||| || Sbjct 304358 GCAACAGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATA 304417 Query 46577 TCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636 || || || || || |||| |||| || ||| | | || |||| Sbjct 304418 TCCTCAATAACCTT--CTTGTCGGGGCGATGGTTCAAGTGAGAAAAGAGAAGGCAAGCAA 304475 Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696 | || || || || || || | | || | ||||| || || ||||| ||||||| Sbjct 304476 AGTCTGTGTGCAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCA 304535 Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756 | | |||||||| || ||||| || || | || ||||||||||| || || || || | Sbjct 304536 TCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCCT 304595 Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACC 46813 | ||||| ||||| || ||||| | || || || | | || |||| |||||| | Sbjct 304596 CCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTAGATTCCTTATCAGAAATCCATC 304655 Query 46814 TTTGAGCCCAATCAGCCTTTTTCTTTACACAAGG 46847 | ||||| | ||||| ||| | | |||||| Sbjct 304656 TCATGGCCCACTGGGCCTTCTTCCTGATACAAGG 304689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712931717584320