Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25] 228 sequences; 27,522,527 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq228 129 4e-25 seq146 86.0 4e-12 >seq228 Length=1302878 Score = 129 bits (142), Expect = 4e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34161 ATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGG 34220 |||| || ||||| | |||||||||||| | || || || || || || ||||| |||| Sbjct 1045808 ATCCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGG 1045867 Query 34221 ACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280 | || | | || ||||||||||| || ||||| ||||| ||||||||||| | Sbjct 1045868 AGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAG 1045927 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | || ||||||||| ||||| ||| | | | | |||| |||| || || | Sbjct 1045928 GGATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCA 1045987 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| || ||||| || ||||||||||| || || ||||||||||| Sbjct 1045988 CCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 1046036 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | |||| ||| ||||| ||||| || ||||| || ||| | || Sbjct 1046589 AGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCC 1046648 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| |||||||| | ||||||||||| || | | |||||| || Sbjct 1046649 TCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCC 1046708 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | ||| | || ||||| |||| |||||||| Sbjct 1046709 TGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTC 1046768 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| |||||||| || || || |||||||| Sbjct 1046769 TTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 1046800 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTC 34236 || || ||||| | ||| ||| ||||| ||||| |||||||||| | || ||| | || Sbjct 1046281 AGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGACAAGGTG-CGGCCATC 1046339 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||||||||||||| |||||||| || ||||||||||| || | | ||||||||| Sbjct 1046340 CTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTC 1046399 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | | | || | |||| | ||||| || || | || ||||| Sbjct 1046400 CTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCACCTCGAGAGTAATGGT 1046459 Query 34357 TTTGCCGGTGAGAGTTTTCAC 34377 ||||| ||||| || || || Sbjct 1046460 CTTGCCAGTGAGGGTCTTGAC 1046480 >seq146 Length=814358 Score = 86.0 bits (94), Expect = 4e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||| ||||| | || || ||||| ||||||||||| || Sbjct 579283 CCACCACGCAGACGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAG 579224 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||||||| ||||| || || |||||||||||| ||| Sbjct 579223 AGGGTACGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 579164 Query 34283 ACGCTCTCCTTGTCGGCTATCT 34304 | | ||||||||| | | ||| Sbjct 579163 ATTCCCTCCTTGTCTGTTGTCT 579142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071102263680