Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25] 228 sequences; 27,522,527 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq148 98.7 9e-16 >seq148 Length=556577 Score = 98.7 bits (108), Expect = 9e-16 Identities = 209/312 (67%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 11464 ATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATCCAC 11523 ||| || ||||| || |||||||| |||||| | | ||||| || | ||| | || Sbjct 192980 ATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAGAGCAAC 192921 Query 11524 CGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGT 11583 |||| ||| ||||||| ||||||| ||| || || || |||| ||| || | Sbjct 192920 AGGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAATATCCTC 192861 Query 11584 TATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGCAAAATCACA 11643 ||||| | ||| || |||| || || ||| | | || ||||| || Sbjct 192860 AATAACCTTCTTGTCGGGGCGATGGTTCAAGTGAGAAAAGAGAAGGCAAGCAAAGTCTGT 192801 Query 11644 ATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCC 11703 |||| || ||||| | | || || || || || || || | || |||||||| || Sbjct 192800 GTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGCATCAAGCC 192741 Query 11704 TCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGC 11763 || || || | ||| || || | |||||| || ||||| || || |||||||||||||| Sbjct 192740 ACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCCTCCACAGC 192681 Query 11764 TGCAAATGCTAC 11775 || || || || Sbjct 192680 GGCGAAGGCCAC 192669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468523464704320