Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25] 228 sequences; 27,522,527 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq228 132 5e-26 seq148 127 2e-24 seq33 116 3e-21 seq146 113 4e-20 seq109 109 5e-19 >seq228 Length=1302878 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| | || | || |||||||||||| ||||||||| Sbjct 1045810 CCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAG 1045869 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | | || || | |||||| || ||| |||| | |||||||||||| |||||| Sbjct 1045870 AGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 1045929 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || |||| |||||| | Sbjct 1045930 ATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACC 1045989 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||||| ||| || ||||| ||||| || ||||| ||||||||| Sbjct 1045990 TCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCATG 1046037 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | || || ||||| || ||||| |||||| Sbjct 1046573 GCCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGA 1046632 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| ||||||||||| ||| | || || ||||||||||| ||||| Sbjct 1046633 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGG 1046692 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || || ||| ||||| | || | ||| ||| ||||||||| Sbjct 1046693 GATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGAC 1046752 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| || || || ||||| || ||||||||||||||| Sbjct 1046753 CTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCATG 1046801 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||||| ||||| |||||||| || ||| | Sbjct 1046266 CCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGAC 1046325 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| | ||||||||| ||| | || | |||||||||||| |||||| Sbjct 1046326 AAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGG 1046385 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | |||||| |||| || | Sbjct 1046386 ATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCACC 1046445 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 |||| |||| ||| || || || || || || |||| Sbjct 1046446 TCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGACGA 1046482 >seq148 Length=556577 Score = 127 bits (140), Expect = 2e-24 Identities = 305/458 (67%), Gaps = 15/458 (3%) Strand=Plus/Plus Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 |||||||| |||| | |||||||| || ||||||||| ||||||| ||||| | Sbjct 192651 ACTTTCGCTCAGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCT 192710 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 ||||| ||||||| | | || | ||| | ||||| || || || || |||| Sbjct 192711 TTTGCTTCCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAAC 192770 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323 ||||| || || || |||||||| || || || |||||||| || || || | || Sbjct 192771 GAGCTCATCTCTCGTGACGAGGGACTACACACAGACTTTGCTTGCCTTCTCTTTT---CT 192827 Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACCGTGCT----GAGCATGTTCAAG--GAGGCG 46377 | | || || | | || ||||||| | | ||| || || | ||||| Sbjct 192828 CACTTGAACCA-----TCGC-CCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCT 192881 Query 46378 GTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAAC 46437 ||||||||||| ||||||| || || | ||| || || | ||| || |||||||||||| Sbjct 192882 GTGGCCATTGAACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAAC 192941 Query 46438 GCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCAC 46497 | || ||||||| | || || ||||| || || || || ||| | || ||| Sbjct 192942 TCTAAGCTAATGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGA 193001 Query 46498 CAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557 | |||| | || || | | ||| || || || || ||| | | ||||| || | Sbjct 193002 AACAAGAAGTACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCA 193061 Query 46558 GGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || || || || || || ||||| || || || || Sbjct 193062 GGAAAGACGAACTTCTTTGAGAAGCGTGTTGGTGACTA 193099 >seq33 Length=1320695 Score = 116 bits (128), Expect = 3e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| ||||||| |||||| ||||| |||||||| || ||| ||| Sbjct 352446 CCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 352505 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||| || ||||| || || ||||| ||| || ||||| | | Sbjct 352506 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 352565 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||| | ||||| ||||| || ||||| || || || || |||| Sbjct 352566 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTGACGA 352625 Query 131225 AA 131226 || Sbjct 352626 AA 352627 >seq146 Length=814358 Score = 113 bits (124), Expect = 4e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| | || | |||||||||||| || |||||||| || Sbjct 579283 CCACCACGCAGACGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAG 579224 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 579223 AGGGTACGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGG 579164 Query 131128 ATTCCTTCTTTGTCGGT 131144 ||||| || ||||| || Sbjct 579163 ATTCCCTCCTTGTCTGT 579147 >seq109 Length=974075 Score = 109 bits (120), Expect = 5e-19 Identities = 464/725 (64%), Gaps = 6/725 (1%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || |||||||| ||||| || || | ||||| || | || | ||| || ||| | || Sbjct 723474 TTAACGACCTGGAACTCACCAGCAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGC 723415 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 |||||| | ||||| |||||| || || ||| ||||||||||||| |||||| Sbjct 723414 TCAAAACATTCGTTGAAGCCCAGAATCTGGCTGGTGCTTGCGGTGGGCATCGGTGCCACC 723355 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || || || || | ||||||| || | |||| || | | |||| ||||| Sbjct 723354 AACAAACTGTTACGAACACCGTGCTGGGCAATCTTCGCCTTCAGAGAATCCCAGTCCCAG 723295 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || || || | ||||||||| || ||||| | ||| |||| | ||||| | Sbjct 723294 AGGTCCGTGGGGGTTCTGTCCCACATATCATACTGGAGAATACCCTGAGAGACGGGGGAG 723235 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGT-TTTGGCGAGCTCGCAACTCGCCTCCAGAGC 145356 || | ||| ||| | || || | ||||| ||||| ||| || || ||| Sbjct 723234 CCCTCGTAGGTTTCATAA-GGACCAAACTCCTTGGCCAGCTCACAAGATGCAGTCAAAGC 723176 Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416 ||| ||| || ||||| || || |||| ||| | | ||||| || ||| | Sbjct 723175 ACCGTGATAGATGGTCTCAAAGATCTGGATGTTTAGCTGTCTTGCTTCGGCGGAGTCGAA 723116 Query 145417 CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCG 145476 ||||| |||||| | || |||||||| | || | | || | | ||||| || Sbjct 723115 CGGCAGGCGCAGGGCAAGGAAGGCATCGGCCAAACCATTGACACCAAGAGCAATGGGGCG 723056 Query 145477 ATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATA-TCGATTACGGTCGATAATT 145534 || |||||||||| || | ||| || | | ||| || | | |||| || ||||| Sbjct 723055 GTGCCGCATGTTGCTCTTCTTGGCC-TCTGGAACAGGGTAGTAGTTTAC-ATCAATAATC 722998 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 || |||||||| || || | |||| || | ||| ||| | |||||| || Sbjct 722997 TTGTTCAAGTTACGAACCAAGACCTGCACAACCTCGTGCAGCTTGCCGAAGTCATACTCT 722938 Query 145595 GCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTC 145654 | | | || | ||| | || | |||| || |||| || || || || Sbjct 722937 CCACGGGCCGCGTCGACAAAAGTAGGAAGCGCGAGAGAAGCCAGGTTGCAGACAGCAACT 722878 Query 145655 TCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCC 145714 || || | | ||||| | | |||||| | ||| | |||| | || |||||| Sbjct 722877 TCGTCAGGAGCACTGTACTCAATGATCTCCGTGCAAAGATTGGAGCTGCGAATAGTTCCC 722818 Query 145715 AGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCA 145774 || || | ||| || || ||| ||||||| || |||||||| ||||| | || |||| Sbjct 722817 AGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTGCCA 722758 Query 145775 GTCTC 145779 ||||| Sbjct 722757 GTCTC 722753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011454763520