Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25] 228 sequences; 27,522,527 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq148 104 3e-17 >seq148 Length=556577 Score = 104 bits (114), Expect = 3e-17 Identities = 200/289 (69%), Gaps = 7/289 (2%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||||||||| || | ||| || || | || ||||| | ||||| || ||| ||| Sbjct 192492 ATGTATGTATCAATCAGCAGGGAGTATGTCTCCGAATGAATGTTCTCAATCATAATCTGG 192433 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTC-TTG-AGAAAATCTCTCTACGA 93479 || |||||||| |||| ||| || | | |||||| || ||| ||| ||| | || | Sbjct 192432 AAGCCGTAGAAGCATCGAGCCTCAGGCACCTGCACCTCATTGCTGAAGCGCTC-CAACAA 192374 Query 93480 GATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAAT 93539 | || ||||| || || || || || || || || || || | | ||| || |||| Sbjct 192373 G-TTCTCATTAACGATTCCGTCAGAGGCAGCGAAGAAGGCAAGGACATGAGAGATGAAAT 192315 Query 93540 GTTTCTCATCATCTTT---AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTT 93596 |||||| || || | | || | ||| ||| |||||||| || ||||| | | Sbjct 192314 AACGCTCATCGTCATTCAGACGGTTGTTCCAGTCGTGCAGATCTTTGGAGAGATCAATCT 192255 Query 93597 CTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645 | ||| | ||||| || || ||||| ||||| |||||||| | ||| || Sbjct 192254 CCTCGGCGGTCCAGAAGGAAGCTTCGGCTTTCTTGTACATTTGCCAAAT 192206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859212946720