Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25] 228 sequences; 27,522,527 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq109 136 7e-27 seq148 125 1e-23 >seq109 Length=974075 Score = 136 bits (150), Expect = 7e-27 Identities = 324/479 (68%), Gaps = 18/479 (4%) Strand=Plus/Minus Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 ||||| | ||| |||| || ||| | || || | || |||||| || || ||| || Sbjct 722562 GGGCAGAACAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTC 722503 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC--TCGTCCGAGCCAGTGTTCTTCCTCA 245087 || || || | ||| || || | || ||||| || ||| || |||||| | | Sbjct 722502 CACAGCGCGTAGAACAGATCACGGG--CTCTGACTTCCTCCTTACCGTGGTTCTTGCGAA 722445 Query 245088 GCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGG 245147 | |||| || || |||| ||| | ||||| ||||| | ||| | ||| | ||||| | Sbjct 722444 GATCCAGGAACTCGAAGATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAG 722385 Query 245148 GCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTA 245206 | |||||||| ||||||||||| || ||| | || | |||||| | ||| || | Sbjct 722384 GGCGCTTGTTACCTCCCTGGTCGACATACCTAGC-AGTGTTGTTGAACACGCGAAGCATG 722326 Query 245207 GGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGG 245266 || || || ||||||||| || || ||||| ||||||| ||| || | | || Sbjct 722325 GGAACAATACCGTTAGAGGACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCAC---GG 722269 Query 245267 TTGCTGATGGAC----ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322 ||| | || || | ||| | ||||| || ||| ||||| | ||| || |||| Sbjct 722268 ATGC-GGTGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTT 722210 Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382 | |||||| || ||||| ||||| ||| |||||| | || || ||||| || | Sbjct 722209 AAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGC 722150 Query 245383 CAGCTGGGGCTTGGGGCTGCACGAG--TTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 |||||||| |||||| | || || ||||||||||| || || || || ||||| Sbjct 722149 AAGCTGGGG-TTGGGG-AGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTA 722093 >seq148 Length=556577 Score = 125 bits (138), Expect = 1e-23 Identities = 295/442 (67%), Gaps = 5/442 (1%) Strand=Plus/Plus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || || ||||| |||| || ||||| ||||| ||||| || | || || ||||||||| Sbjct 192666 CTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTC 192725 Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 ||||| ||| || | | |||||| || ||||| ||||| ||||| |||||| | Sbjct 192726 TGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGT 192785 Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884 |||||||| || || | |||||||| ||||| || || || ||| | | || Sbjct 192786 GACGAGGGACTACACACAGACTTTGCTTGCCTTCTCTTTTC---TCACTTGAACCATCGC 192842 Query 42885 CCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTC 42944 ||| ||| || | || || ||| ||||| |||| || || |||||||| Sbjct 192843 CCCGACAAGAAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTGAACAGGAGTTC 192902 Query 42945 CTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTAC 43004 | || | | || || || | || | ||||||||| | || |||||| |||| Sbjct 192903 TTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAATGTGCCAGTAT 192962 Query 43005 ATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACAC 43063 || ||| ||| || || | || | || | ||| || | || |||| | Sbjct 192963 ATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAG-TACTTCAACTC 193021 Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123 || |||||||||||| ||||| | |||||| | | || ||||| ||||| || || Sbjct 193022 TCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGAAAGACGAACTTCTTTGA 193081 Query 43124 GAAGCGCGTCGCCGACTACCAG 43145 |||||| || | ||||||||| Sbjct 193082 GAAGCGTGTTGGTGACTACCAG 193103 Score = 113 bits (124), Expect = 9e-20 Identities = 202/289 (70%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 42309 ATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA 42367 ||||||||||| || | || | ||| ||||||||||||||||||||| || |||| || Sbjct 192215 ATGTACAAGAAAGCCGAAGCT-TCCTTCTGGACCGCCGAGGAGATTGATCTCTCCAAAGA 192273 Query 42368 CACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAAAAACATAC 42423 | || |||| | || |||||| |||| || | |||| || | | | Sbjct 192274 TCTGCACGACTGGAACA-ACCGTCTGAATGACGATGAGCGTTATTTCATCTCTCATGTCC 192332 Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 | ||||||||||| ||||||||||| || || ||||||||| || | |||| | Sbjct 192333 TTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGCTTCAGCA 192392 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 | ||||||||| |||||| || |||||||||||||||||||| || |||||| Sbjct 192393 ATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATTATGATTGAGAACA 192452 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC 42592 | || || ||| ||| || ||| | | || |||||| ||| || Sbjct 192453 TTCATTCGGAGACATACTCCCTGCTGATTGATACATACATCAAGGAGCC 192501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944336508633280