Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25]
228 sequences; 27,522,527 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq228 98.7 1e-15
seq146 87.8 2e-12
>seq228
Length=1302878
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| || || | ||| || |||||||| |||||||| | || ||| | | | |||
Sbjct 1045825 AGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATCT 1045884
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | |||||| || || | ||||| ||||||||||| ||||| || || || || |||
Sbjct 1045885 TCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCT 1045944
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || || ||||| || | || | ||||
Sbjct 1045945 TGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGTC 1046004
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||| | ||| || ||||| || |||||
Sbjct 1046005 TTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 1046036
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | |||||||| || |||||||| || || | | |||||| | ||
Sbjct 1046280 AAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGACAAGGTGCGGCCATC 1046339
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| | ||||||||| || |||| || ||||||||||| ||||| || || || || ||
Sbjct 1046340 CTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTC 1046399
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| || || | ||||| | || ||||| || | ||| | |||
Sbjct 1046400 CTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCACCTCGAGAGTAATGGT 1046459
Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433
|||||| || | || || ||||
Sbjct 1046460 CTTGCCAGTGAGGGTCTTGACGA 1046482
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| || || ||||| ||||| | | ||||| | || || |||||||||||
Sbjct 1046604 GTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCA 1046663
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| |||| | ||||||||||| ||||| || || || || || || || || |||
Sbjct 1046664 GCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTCGACTTG 1046723
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || || | || || || || | || | ||||||||| || | |||
Sbjct 1046724 ACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTC 1046783
Query 64427 TTTACGAAAATTTGCAT 64443
|| |||||||| |||||
Sbjct 1046784 TTGACGAAAATCTGCAT 1046800
>seq146
Length=814358
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||||| || || | ||||| || || || |||||||| || |
Sbjct 579284 ACCACCACGCAGACGGAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 579225
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||| || |||| || ||||||||||| || | || || |||||||||||||| ||
Sbjct 579224 GAGGGTACGACCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGG 579165
Query 64336 AATTCCTTCTTTTTCT 64351
||||| || || |||
Sbjct 579164 GATTCCCTCCTTGTCT 579149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499643376012320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |