Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25] 228 sequences; 27,522,527 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq148 134 2e-26 seq109 93.3 5e-14 >seq148 Length=556577 Score = 134 bits (148), Expect = 2e-26 Identities = 348/522 (67%), Gaps = 24/522 (5%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || || |||||||| |||||||| ||||| || | || |||| | ||||| Sbjct 193100 GTAGTCACCAACACGCTTCTCAAAGAAGTTCGTCTTTCCTGCAAGCGAGATACTTTCCAT 193041 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCC----CAATCTGTTTGAG 127344 || || || ||||| ||||| | | || ||| || ||| | | Sbjct 193040 GAAGTCGAAGGGGTTGGGAGAGTTGAAGTACTTCTTGTTTCCAAGAGCAACC------AA 192987 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 || ||||| | ||| ||||||| |||| |||| || ||||||||| || | ||| Sbjct 192986 CAGCCGATCAGCAACGAACTCAATATACTGGCACATTAGCTTAGAGTTCATGCCCAGGAG 192927 Query 127405 -GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGA 127463 | ||| || || ||||| | |||| ||| |||||| ||||||| || | | Sbjct 192926 AGCAACA-GGAAGAGCGTCTGTCAAGAACTCCTGTTCAATGGCCACAGCCTCAACGATAA 192868 Query 127464 TGGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAA-GAGTTCCACAGCA 127522 | | | |||| | | | || | || | | |||| || ||| |||| Sbjct 192867 TATCCTCAATAACCTTCTTGTCGGGGCGATGGT-TCAAGTGAGAAAAGAGAAGGCAAGCA 192809 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || ||| ||| || ||||||||||| |||||||| || || ||||| ||||| ||| Sbjct 192808 AAGTCTGTGTGTAGTCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCAGGC 192749 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 || | || |||||||||| |||||| || | | ||| || |||||||| ||||| ||| Sbjct 192748 ATCAAGCCACGCTTCTTCAGCCAGAAGATGGAAGCAAAAGATCCAGAGAAAAAGATTCCC 192689 Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGC-AAAGGAGCGGGACTTTGTATC---AAA 127698 |||||| ||||| || | || |||| || |||| | || | |||| || Sbjct 192688 TCCACAGCGGCGAAGGCCACAAGGCGCTGAGCGAAAGTA----GATTCCTTATCAGAAAT 192633 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 ||| |||| |||||||| ||||| ||| |||||| || || Sbjct 192632 CCATCTCATGGCCCACTGGGCCTTCTTCCTGATACAAGGAAC 192591 >seq109 Length=974075 Score = 93.3 bits (102), Expect = 5e-14 Identities = 327/508 (64%), Gaps = 7/508 (1%) Strand=Plus/Minus Query 116668 TAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAG 116727 || || || |||||||| ||||| | | |||| | || || || | || || ||| Sbjct 722616 TAAAGAGCATCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAG 722557 Query 116728 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 116787 || |||| ||| | ||| |||||| ||||||||||| || || ||| |||| ||| Sbjct 722556 AACAGAGTCCAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGC 722497 Query 116788 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847 || |||| ||||| || | |||| || | || || || || | |||| Sbjct 722496 GCGTAGAACAGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGG 722437 Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---A 116904 || || | |||||| || ||||| || || ||||| | || | | || ||| Sbjct 722436 AACTCGAAGATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTG 722377 Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964 ||| |||||| |||||||| || || ||| || ||||||||||| |||| ||| Sbjct 722376 TTACCTCCCTGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATA 722317 Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGA 117022 || | ||| ||||| || || | || || ||| || |||| | || ||| | Sbjct 722316 CCGTTAGAGGACCCATTAGTGCCACCAATGTAGGAGCCT--GTGGCACGGATGCGGTGAA 722259 Query 117023 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGT 117082 || | || ||||| || || ||| ||||| || || | | || || ||| Sbjct 722258 CGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGT 722199 Query 117083 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCC 117142 |||| || || || || |||| | ||| ||||||||| || | || || Sbjct 722198 AGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGGGGTT 722139 Query 117143 TTGGTGTACCAGCGTTGAAGAGGGTTGG 117170 || |||||||| ||||| || || || Sbjct 722138 GGGGAGTACCAGCATTGAACAGAGTAGG 722111 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 116474 |||| | ||||||| |||| || ||||| || || |||| || || | || | Sbjct 722923 GACAAAAGTAGGAAGCGCGAGAGAAGCCAGGTTGCAGACAGCAACTTCGTCAGGAGCACT 722864 Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534 |||||| || || ||||| || | ||| || || ||| || |||| |||||| || || Sbjct 722863 GTACTCAATGATCTCCGTGCAAAGATTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTT 722804 Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594 ||| |||| || ||||||||||| |||||| | || | || ||||| || || | Sbjct 722803 GCTCTTCTTGTTGCAGGCATCCTTGTAAAGCATAAAGGGGTTGCCAGTCTCGGTCTGAGC 722744 Query 116595 CTTGAGAATAGCCTTCCA 116612 || |||||||| | ||| Sbjct 722743 CTCAAGAATAGCATACCA 722726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505451504480