Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25] 228 sequences; 27,522,527 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq179 111 5e-19 seq166 91.5 4e-13 >seq179 Length=69050 Score = 111 bits (122), Expect = 5e-19 Identities = 109/140 (78%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| |||||||| |||| ||||| ||| |||| ||||||||| Sbjct 44943 AGAATTTCCTTGAGACGAGGAACACCGAGGGTGACGTT---CTTCGACGAGACACCAGCA 44887 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 |||||||||||||||| || | || |||| |||||||||||| || || || | | Sbjct 44886 AAGTGGAAAGTATTCAAGGTCATCTGTGTAGCGGGCTCACCAATAGACTGAGCGGCTAGC 44827 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| ||||| Sbjct 44826 ACACCAACCATTTCACCTGG 44807 >seq166 Length=364592 Score = 91.5 bits (100), Expect = 4e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | ||||||||||||||| ||||| || |||||||| |||||||| || || Sbjct 252278 GCACCGTGCGCAATCATACAATCACGTTCCATCTCTCCGAAACGCAGACCACCGTCACGG 252219 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGA 251574 || ||||| || ||||||| || || ||| Sbjct 252218 GCTCTACCTTCCACAGGCTGCCGGGTCAGA 252189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471813300452836