Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25] 228 sequences; 27,522,527 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq33 223 1e-52 seq228 163 9e-35 seq180 136 1e-26 seq179 102 2e-16 >seq33 Length=1320695 Score = 223 bits (246), Expect = 1e-52 Identities = 490/730 (67%), Gaps = 7/730 (1%) Strand=Plus/Plus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 ||||| | || || || || ||||| || || || ||||| | ||| | | |||| | Sbjct 1273455 CCGCTGTCGGTATTGACTTGGGTACCACCTACTCCTGTGTGGGTGTCTTCAGAGATGACC 1273514 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| ||||| || || || |||||| | || || || || | ||| || |||| Sbjct 1273515 GCATTGAAATCATTGCCAACGACCAGGGTAACCGTACTACTCCCTCGTTCGTGGCTTTTA 1273574 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || ||||| | || || || | | Sbjct 1273575 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAATCAGGTCGCCATGAACCCTCACA 1273634 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434 | || ||||| ||||||||||| || || ||| | | || || | | | || Sbjct 1273635 ACACCGTTTTCGATGCTAAGCGTCTGATCGGTCGTCGGTTCCAAGATGCTGAGGTTCAG- 1273693 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 |||||| | || || | ||||| | ||||| | | ||| || | || || || || Sbjct 1273694 -TCTGATATGAAGCACTGGCCTTTCAAGGTTGT-CGAGAAG--GGCGGCAAGCCCATCAT 1273749 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 ||||||||| | || || || || || || || ||||| || || || ||||| Sbjct 1273750 TGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTCACCCCTGAAGAGATCTCCTCCATGGT 1273809 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | ||| ||| || | |||||||| || | |||| || || | | ||||| Sbjct 1273810 CCTGACTAAGATGCGTGAGACCGCTGAAGCCTACCTCGGTGGCACTGTCAACAACGCTGT 1273869 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 || || || || ||||| || || || | |||||| || || || |||||||| Sbjct 1273870 CATCACCGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGATGCTGGTCT 1273929 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||| || || | || || || | || || || || || ||||| || || ||||| || Sbjct 1273930 CATCGCCGGCCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCTGCCATTGCCTA 1273989 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || ||||| || | | || || || | || || || ||| | |||||||| Sbjct 1273990 CGGTCTTGACAAGAAGGCCGAGGGCGAGCGTAACGTCCTGATCTTCGATCTTGGTGGTGG 1274049 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 |||||| ||||| || || || || |||| ||||| || || || || || || || || Sbjct 1274050 TACTTTCGATGTTTCCCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGGCTACCGC 1274109 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||| || || || || ||||| || || || ||||| ||||| ||| || |||||||| Sbjct 1274110 TGGCGACACTCACCTGGGTGGTGAGGACTTCGATAACCGTCTTGTTAACCACTTTGTTAA 1274169 Query 349915 AGAATTTAAG 349924 ||||| ||| Sbjct 1274170 TGAATTCAAG 1274179 >seq228 Length=1302878 Score = 163 bits (180), Expect = 9e-35 Identities = 177/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | || || ||||| || || || || ||||| ||||| ||||| Sbjct 1046034 CATGCCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATC 1046093 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || || |||||||||||||| |||||||||||||| ||||| || |||||||| Sbjct 1046094 AGACAAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGG 1046153 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 ||| || || || |||||||| || || ||| || ||||| || || | || || | | Sbjct 1046154 AGGGATACCCTCCTTATCCTGGATCTT-GCTCTTGACATTGTCGATGGTGTCTGAAGACT 1046212 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| | ||| | |||||||| || || || || || || || ||||| Sbjct 1046213 CTACTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 1046264 Score = 131 bits (144), Expect = 5e-25 Identities = 174/238 (73%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 140501 ATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATT 140560 |||| ||| |||||||| | | || || || || || || ||| ||||||||||| Sbjct 1045801 ATTTAGCAT-CCACCACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATT 1045859 Query 140561 ATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTG 140620 ||||| || | || | ||||||||| | || || ||||| ||||| ||||| ||||| Sbjct 1045860 GTAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTG 1045919 Query 140621 ATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAG 140679 |||||||| || || || || || || || || ||| || || || ||||||| || | Sbjct 1045920 GTCAGGAGGGATGCCCTCCTTGTCTTGGATCTT-GCTCTTCACGTTGTCAATCGTGTCGG 1045978 Query 140680 ATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | | || || || || |||| ||||||||||| || || || || || |||||||| Sbjct 1045979 AGGACTCCACCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 1046036 Score = 125 bits (138), Expect = 2e-23 Identities = 171/236 (72%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||| | | ||||| || || |||||||| || || || || |||| Sbjct 1046566 TTTGCATGCCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTAT 1046625 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | || || ||||| || || || || ||||| || || | || ||||| | Sbjct 1046626 AATCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGT 1046685 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| || || || ||||||||||| || | || ||||| ||||| | || | || Sbjct 1046686 CAGGAGGGATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTC-GCTG 1046744 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || | || | ||||| || || || || || || ||||||||||| Sbjct 1046745 GACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 1046800 Score = 122 bits (134), Expect = 3e-22 Identities = 163/224 (73%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || || || ||||| || || || ||||| |||| Sbjct 1046258 TTTGCATACCACCACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTAT 1046317 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || || || || ||||| || | || || ||||| || || ||||| ||||| | Sbjct 1046318 AGTCGGACAAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGT 1046377 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 ||||||| || || || || ||||| || || | || || |||||||| | ||| | || Sbjct 1046378 CAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATC-GCTG 1046436 Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 | ||| || || || |||| ||||| || || || || || || Sbjct 1046437 GATTCCACCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGAC 1046480 >seq180 Length=51133 Score = 136 bits (150), Expect = 1e-26 Identities = 331/495 (67%), Gaps = 11/495 (2%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 ||||| || || |||||||| ||||| || ||| || ||| || || || || || Sbjct 33021 GCTGTCATCACCGTACCAGCTTATTTCAACGATAATCAACGTCAGGCGACGAAGGACGCA 32962 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || ||||||||||| | || || ||||| |||||||| || || || Sbjct 32961 GGTGCCATTGCCGGTTTAAATGTTCTCCGCATCATCAATGAGCCCACTGCCGCCGCTATC 32902 Query 349730 GCATATG-----GGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATT 349784 || |||| |||| ||||| || |||| ||| | || || | |||| Sbjct 32901 GCCTATGGACTCGGCTCCGGAAAAT--CCGAAAAAGAGCGTAATGTCCTGATATATGATC 32844 Query 349785 TAGGTGGTGGTACTTTTGATGTATCACTACT-AACACTTGAAGAGGGAATTTTTGAAGTT 349843 | ||||| |||||||| ||||| || || || |||| || ||| || |||| || Sbjct 32843 TTGGTGGAGGTACTTTCGATGTGTCTCTTCTCAACA-TTCAAGGAGGTGTTTTCACTGTC 32785 Query 349844 AAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCG 349903 || || || || |||||||| ||||| |||||| |||||||||| | ||| || Sbjct 32784 AAGGCCACAGCCGGTGATACTCATCTCGGTGGACAAGATTTTGACACCAACCTCCTTGAA 32725 Query 349904 CATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCA 349963 || || || ||||| || | || || ||| | || || | ||||| Sbjct 32724 CACTTCAAGAAGGAATTCCAGAAGAAGACTGGAAAGGATCTCTCAGGCGATGCCAGAGCT 32665 Query 349964 ATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAA 350023 | || || | ||||| || || || ||||| |||||| | | || |||| || Sbjct 32664 CTTCGCCGTTTGAGAACGGCCTGCGAGCGTGCCAAGCGTACACTGTCCAACGCTACACAG 32605 Query 350024 ACCTCTATTGAAATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACG 350082 || || |||| ||||| ||| ||| | ||||| | |||||| || ||||| || || Sbjct 32604 ACAACTGTTGAGATTGACTCT-TTGTTCGATGGAGAGGATTTCAACTCGTCTATCACTCG 32546 Query 350083 TGCTCGGTTTGAAGA 350097 ||| || ||||| || Sbjct 32545 TGCCCGCTTTGAGGA 32531 >seq179 Length=69050 Score = 102 bits (112), Expect = 2e-16 Identities = 206/306 (67%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 378168 GTTTCTTACAGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCG 378227 |||||| ||||| ||||| ||||||| | ||||| || || |||| || || Sbjct 44203 GTTTCTGACAGTACCGTCATACTTAACCATGACCTCTTCCAAGGCCTTAACCAGCTTCCG 44144 Query 378228 AGAAATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACC 378287 |||||||||||||| ||| || || |||||||| || | ||| | ||||| | Sbjct 44143 CTGAATATAACCAGTTTCGGCAGTCTTGACGGCAGTATCGATCAGACCTTCTCGACCGGC 44084 Query 378288 CATTGCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAA 378347 ||| ||||| ||||| |||||||| || || || |||| | | | || | || | ||| Sbjct 44083 CATGGCATGAAAGAAGAATTCAGTTGGGGTTAGGCCACGCAGATAAGAGTTTTCCACAAA 44024 Query 378348 TCCTCTTGCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAA 378407 ||| | | | || || | ||||| || || |||| || | ||||||| | || Sbjct 44023 TCCGCGAGATTCCGGAGAGTAATCATCCTTGGTGAAATGGGGAAGAGTACGATATTTGAA 43964 Query 378408 CCCATATGGAATTCGTTTTCCATCAACATTCTGTTGACCAAGTGCAGAAACCATTTGAGC 378467 || | ||||| || || || || || ||| ||||| | ||| | ||| |||| Sbjct 43963 TCCGAAAGGAATACGCTTGCCTTCGACGGACTGCTGACCCACAACAGCAGTCATCTGAGA 43904 Query 378468 AATATT 378473 ||||| Sbjct 43903 GATATT 43898 Score = 87.8 bits (96), Expect = 5e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 377494 ACACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGC 377553 ||||||||||||||||||||||| | || | || |||| |||||||||||| ||||| Sbjct 44895 ACACCAGCAAAGTGGAAAGTATTCAAGGTCATCTGTGTAGCGGGCTCACCAATAGACTGA 44836 Query 377554 GCTGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596 || || | || ||||||||||| || || || || ||||| Sbjct 44835 GCGGCTAGCACACCAACCATTTCACCTGGGTTAGCAGCAGCCT 44793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515249973563084