Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25]
228 sequences; 27,522,527 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq228 176 5e-39
seq33 132 5e-26
seq146 116 4e-21
>seq228
Length=1302878
Score = 176 bits (194), Expect = 5e-39
Identities = 168/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| || || |||||||| |||||||| ||||| || || | |||| |||||
Sbjct 1046480 GTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTGAT 1046421
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
|| | ||| | || || |||||||||||||| || ||||| |||||||||||||| |||
Sbjct 1046420 AACGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGATT 1046361
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| ||||| ||||| | ||||||| || ||| | | |||||||| | || ||||||
Sbjct 1046360 TTCGCTGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCCGACTATAACATTCAGAAGGAA 1046301
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||||| || || ||| | |||||||| |||||
Sbjct 1046300 TCGACTCTCCACCTCGTCCTTCGTCTTCGTGGTGG 1046266
Score = 167 bits (184), Expect = 3e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || |||||||| || || | ||||| ||||| |
Sbjct 1046800 ATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 1046741
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| | || |||||||| |||||||| || ||||| ||||||
Sbjct 1046740 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 1046681
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | ||||| ||||| ||||| |||||||||| || || || | || |||||
Sbjct 1046680 CAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAAC 1046621
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| |||||||| ||||| || || || | |||||||| |||||
Sbjct 1046620 ATCCAGAAGGAATCTACTCTGCACCTGGTTCTCCGTCTTCGTGGTGG 1046574
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| || || || |||||||| || | || || |||||
Sbjct 1046264 ATGCAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCA 1046205
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| || || ||||| |||||||| || ||||| || ||
Sbjct 1046204 GACACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAA 1046145
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||| |||||||| || |||| |||||| | | || || |||
Sbjct 1046144 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTACCTTGTCTGATTACAAT 1046085
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||||||||| || ||||| ||| | ||||| || |||||
Sbjct 1046084 ATCCAAAAGGAATCCACACTGCATCTGGTCCTCCGTCTGCGTGGTGG 1046038
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||| ||||| ||||| || ||||| |||||
Sbjct 1046036 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTCC 1045977
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || ||||| || || || ||||||||||| || ||||| ||||||
Sbjct 1045976 GACACGATTGACAACGTGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCAG 1045917
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||||||||| | || |||| | ||||| | || || |||
Sbjct 1045916 CAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACAAT 1045857
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| |||||||| ||| || || || || ||||||| || ||||||
Sbjct 1045856 ATTCAAAAGGAGAGCACGCTCCACCTGGTGCTGCGTCTGCGTGGTGGA 1045809
>seq33
Length=1320695
Score = 132 bits (146), Expect = 5e-26
Identities = 140/182 (77%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||||||||| || || |||||||| | || | |||
Sbjct 352626 TTCGTCAAGACCCTGACGGGTAAGACTATTACCCTCGACGTTGAGTCGAGCGACACCATC 352567
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||||| || || |||||||||||||| || || || ||||||||||| ||
Sbjct 352566 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTG 352507
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593
|| || ||||||||||| || ||||||| || ||||| ||| ||||| || | || ||
Sbjct 352506 ATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATTCAGAA 352448
Query 27594 GG 27595
||
Sbjct 352447 GG 352446
>seq146
Length=814358
Score = 116 bits (128), Expect = 4e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
|||||||||||||| || || |||||||||||||| || || ||||| ||||| ||||||
Sbjct 579150 GACAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 579209
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|| | ||||||||| | ||||| || |||| ||||| || || || || || || |
Sbjct 579210 GACGGTCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTGCTC 579269
Query 27619 CGTCTTCGCGGTGG 27632
||||| || |||||
Sbjct 579270 CGTCTGCGTGGTGG 579283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570308774615360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |