Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25] 228 sequences; 27,522,527 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq228 167 6e-36 seq33 100 7e-16 >seq228 Length=1302878 Score = 167 bits (184), Expect = 6e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || || |||||||| ||||||| ||||||||| | ||| || | |||||| Sbjct 1046053 AGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATCT 1046112 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||| ||||| || || ||||| || || || ||||| ||||| || Sbjct 1046113 TCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCC 1046172 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| |||||||||||||| | || || ||||| ||||| ||| Sbjct 1046173 TGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGTC 1046232 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| | ||| || | ||| | |||||| Sbjct 1046233 TTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 1046264 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| ||| || ||||| | ||||||||||| | || Sbjct 1045815 ACGCAGACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGT 1045874 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||||||||||| | |||||| ||||||||||| || || || ||||| || || || || Sbjct 1045875 CCTCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCC 1045934 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| |||||| || || ||||| |||| ||||| || | Sbjct 1045935 CTCCTTGTCTTGGATCTTGCTCTTCACGTTGTCAATCGTGTCGGAGGACTCCACCTCCAG 1045994 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | ||| || | ||| | ||||| Sbjct 1045995 GGTAATGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 1046036 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || ||||| ||||| ||||| || |||| || ||||||| | ||| Sbjct 1046579 ACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGT 1046638 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| |||||||| || | || || ||||| || || ||||| Sbjct 1046639 GCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACC 1046698 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| || || ||||| ||| ||| || || ||||| || || || || || Sbjct 1046699 CTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGACCTCCAA 1046758 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||| | ||| || | ||| | ||||| Sbjct 1046759 GGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 1046800 Score = 123 bits (136), Expect = 6e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| ||||||||||| ||||| || || | || || |||| ||| || Sbjct 1046271 ACGAAGACGAAGGACGAGGTGGAGAGTCGATTCCTTCTGAATGTTATAGTCGGACAAGGT 1046330 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| |||||||| || || || || ||||| || || ||||| Sbjct 1046331 GCGGCCATCCTCCAACTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGGATACC 1046390 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || || ||||| || || |||||| || | Sbjct 1046391 CTCCTTGTCCTGGATCTTCGACTTAACGTTATCAATGGTATCGCTGGATTCCACCTCGAG 1046450 Query 225672 CGTGATCGTCTTGCCCGT 225689 || || |||||||| || Sbjct 1046451 AGTAATGGTCTTGCCAGT 1046468 >seq33 Length=1320695 Score = 100 bits (110), Expect = 7e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594 ||||| ||| || || | ||||| || |||||||| ||||||||||| || || || Sbjct 352457 TTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGC 352516 Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654 ||||| || || ||||| |||||||| |||||||| ||| || ||||||||||| Sbjct 352517 TGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCG 352576 Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 352577 CTCGACTCAACGTCGAGGGTAATAGTCTTACCCGTCAGGGTCTTGACGAA 352626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192527716318232