Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25] 228 sequences; 27,522,527 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq228 131 4e-25 seq109 96.9 8e-15 >seq228 Length=1302878 Score = 131 bits (144), Expect = 4e-25 Identities = 159/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || || || || |||||||| |||||||| | || || | ||||| Sbjct 1046052 GAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATC 1046111 Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009 ||| || ||||| || || ||||| || | ||| || || | | ||| || ||||| Sbjct 1046112 TTCAAGTTGCTTT--CCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTA 1046169 Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || |||||| | || | | |||||||| ||||||||| | || ||| Sbjct 1046170 TCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATA 1046229 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || |||||||||||||| ||||||| ||||| Sbjct 1046230 GTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 1046264 Score = 104 bits (114), Expect = 5e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| ||||| || |||||||||| | || ||||||||||| | || || ||||| Sbjct 1045845 CTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAA 1045904 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 ||| || | ||||||||| | | ||| || ||||| ||||| || || || || | Sbjct 1045905 GATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTT 1045964 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | |||| || ||| || || || ||||| || || || ||||||||||| || Sbjct 1045965 GTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGAC 1046024 Query 152093 GAAGACCTGCAT 152104 ||||| |||||| Sbjct 1046025 GAAGATCTGCAT 1046036 Score = 104 bits (114), Expect = 5e-17 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || |||||||| || || |||||||| ||||||| | ||| | ||||| Sbjct 1046588 GAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATC 1046647 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || ||||| || | | ||||||||| | | ||| || ||||| || Sbjct 1046648 CTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATC 1046707 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATA 152069 ||||| || |||||| | || | |||| || |||| || |||| || || Sbjct 1046708 CTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCGAC-CTCCAAG-GTGATG 1046765 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||||||||||||||| ||||| | |||||| Sbjct 1046766 GTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 1046800 >seq109 Length=974075 Score = 96.9 bits (106), Expect = 8e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688 ||||| || | ||||| ||||||| || ||||||||||| || | ||||| ||| Sbjct 722489 TTCTACGCGCTGTGGACCCCTGATCTGTTCATGAAGCGAGTTGAGTCCAACGGTGACTGG 722548 Query 115689 AGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAG 115748 | || || || |||||||||||||||||| | | |||||||||||| |||||||| Sbjct 722549 ACTCTGTTCTGCCCCAATGAAGCCCCTGGTTTGGCAGATGTTTATGGTGATGAGTTTGAT 722608 Query 115749 AATCTTTACGAAAGGT 115764 |||||| ||| ||| Sbjct 722609 GCTCTTTATGAACGGT 722624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153817429400988