Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001715275.2_202016-10-25]
228 sequences; 27,522,527 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq228 152 1e-31
seq33 105 2e-17
>seq228
Length=1302878
Score = 152 bits (168), Expect = 1e-31
Identities = 158/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || |||||||| || || || |||||| | ||||| || | |||
Sbjct 1046797 CAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGCGAC 1046738
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||||||||| || || || |||||||| ||||||||
Sbjct 1046737 ACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAGCAG 1046678
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || ||||| || || |||||||| ||||| | |||||| ||||||||||| ||
Sbjct 1046677 CGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAACATC 1046618
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || ||||| || ||||| || |||
Sbjct 1046617 CAGAAGGAATCTACTCTGCACCTGGTT 1046591
Score = 145 bits (160), Expect = 2e-29
Identities = 158/207 (76%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || |||||||| ||||| || ||||| | || || || ||||||
Sbjct 1046261 CAAATCTTCGTTAAGACTCTCACGGGAAAGACTATCACATTAGAAGTAGAGTCTTCAGAC 1046202
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| ||||| || || || |||||||| || || ||
Sbjct 1046201 ACCATCGACAATGTCAAGAGCAAGATCCAGGATAAGGAGGGTATCCCTCCTGATCAACAG 1046142
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGT 178102
|| || ||||| || ||||| || || |||||||| | || |||| | ||||| || |
Sbjct 1046141 CGTCTCATCTTTGCTGGAAAGCAACTTGAAGATGGCCGTAC-CTTGTCTGATTACAATAT 1046083
Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129
|||||| ||||| ||||||||||| ||
Sbjct 1046082 CCAAAAGGAATCCACACTGCATCTGGT 1046056
Score = 120 bits (132), Expect = 7e-22
Identities = 148/200 (74%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| || || ||||| || || || || || |||||||||||| | || ||||| |
Sbjct 1046482 TCGTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTG 1046423
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| ||||| || ||||| |||||||| || || |||||||| |||||||| || || |
Sbjct 1046422 ATAACGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGA 1046363
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAA 178109
| ||||| || || ||| | || ||||| | || |||| |||| |||||| | || ||
Sbjct 1046362 TTTTCGCTGGCAAGCAGTTGGAGGATGGCCGCAC-CTTGTCCGACTATAACATTCAGAAG 1046304
Query 178110 GAATCAACACTGCATCTTGT 178129
||||| || || || || ||
Sbjct 1046303 GAATCGACTCTCCACCTCGT 1046284
>seq33
Length=1320695
Score = 105 bits (116), Expect = 2e-17
Identities = 116/153 (76%), Gaps = 6/153 (4%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985
|||||| || || || || || || || || |||||||| || || ||| |||||
Sbjct 352627 TTTCGTCAAGACCCTGACGGGTAAGACTATTACCCTCGACGTTGAGTCGAGC---GACAC 352571
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| |||||||| ||||| |||||||| || || ||||| || |||||||| ||
Sbjct 352570 CATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCG 352511
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078
|| |||||||| || || ||||| || |||||
Sbjct 352510 CCTGATCTTCGCTGGTAAGCAGCTTGAGGATGG 352478
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203727683600232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |