Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28]
883 sequences; 29,478,624 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq379 136 5e-27
seq135 105 8e-18
>seq379
Length=11336
Score = 136 bits (150), Expect = 5e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| ||||| || | |||||||||||||||||||||||||| | || |||| | |
Sbjct 2833 ACGCAGCACCAGGTGGAGCGTGCTCTCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCC 2774
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || | ||||||||||||||| ||||| ||||||||||| | || | || ||||||
Sbjct 2773 ATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTT 2714
Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146
||| ||| || || | ||| | | | ||||||| || ||||| || | || |
Sbjct 2713 GTCTTGGATCTTGCTCTTCA-CGTTGTCAATCGTGTCGGAGGACTCCACCTCCAGGGTAA 2655
Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| || || || || ||||| || ||||| |||||
Sbjct 2654 TGGTCTTTCCGGTGAGAGTCTTGACGAAGATCTGCAT 2618
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
|||| ||||| |||| |||||||| ||||||||||||| || || || | || ||
Sbjct 2598 ACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATCTTCA 2539
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|| ||||| ||||| || ||||| ||||| || || | || | | |||||| ||| |
Sbjct 2538 AGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCCTGG 2479
Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154
|| || |||| | | | ||||| || || || || | ||||| || ||
Sbjct 2478 ATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGTCTTT 2419
Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||||| || ||||| || |||||||||||
Sbjct 2418 CCCGTGAGAGTCTTAACGAAGATTTGCAT 2390
Score = 96.9 bits (106), Expect = 4e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| || || || ||||| | ||||| || | || || |||||||| ||||||||
Sbjct 2044 TCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAA 1985
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111
|| | ||||||||||| | || | | |||||| ||| ||| | || | |||| |
Sbjct 1984 ATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCC-TGAATCTTCGACTTGACATT 1926
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||||| || || || || | |||||||| |||||||| || ||||| ||
Sbjct 1925 GTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGAC 1866
Query 43172 AAAGATTTGCAT 43183
|| || |||||
Sbjct 1865 GAAAATCTGCAT 1854
Score = 84.2 bits (92), Expect = 3e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| ||||| || || || | || || || | || || | |||||| ||||||||
Sbjct 2352 TCCTTCTGAATGTTATAGTCGGACAAGGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAA 2293
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || ||||||||||| | || | | |||||||||| ||| || || | |
Sbjct 2292 ATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTAACGTTA 2233
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | || ||||| |||||||| |||| || ||||| ||||| || || ||||| ||
Sbjct 2232 TCAATGGTATCGCTGGATTCCACCTCGAGAGTAATGGTCTTGCCAGTGAGGGTCTTGAC 2174
>seq135
Length=180033
Score = 105 bits (116), Expect = 8e-18
Identities = 134/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053
|||| ||||| ||||| || ||| || || | || || ||||||||||||||||| |
Sbjct 120697 CCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 120638
Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113
| || ||||||||||| | || | | |||||||||| ||| || |||| ||| |
Sbjct 120637 TCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 120579
Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | ||||||||||| || || |||| || ||||| || ||||| || ||||| ||
Sbjct 120578 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 120519
Query 43173 AA 43174
||
Sbjct 120518 AA 120517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571811288563240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |