Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28]
883 sequences; 29,478,624 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq35 221 2e-52
>seq35
Length=214891
Score = 221 bits (244), Expect = 2e-52
Identities = 592/899 (66%), Gaps = 12/899 (1%)
Strand=Plus/Minus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
|| ||||| || || |||||| |||| | ||| ||||| || || | || | |
Sbjct 142958 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 142899
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308
|| || |||| || ||||| ||||| || |||||||| |||| || || ||
Sbjct 142898 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 142839
Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368
||||| | | ||| |||||| || || ||||| |||||| |||||| | |
Sbjct 142838 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 142779
Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428
||||| | |||||| || || | ||| || || | | | ||||| || ||||| ||||||
Sbjct 142778 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 142719
Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488
|| || | || ||||| ||||| || | || | | ||| |||| ||||||||| ||
Sbjct 142718 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 142659
Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCT 63548
||||| || || || ||| || ||||||| || || || ||
Sbjct 142658 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 142599
Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TGTCATAGATGCCTTC 63607
|| || || || | || ||||| | || || || |||| | |||| ||||| || ||
Sbjct 142598 ATACCGCCAGCTGTCTTCGAGATCATGGCACAA-GTCTTAAGGGTGTCGTAGATACCCTC 142540
Query 63608 TATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGAGTAGT 63664
|||||||| || |||| | | || || || |||| | ||| | | | |||
Sbjct 142539 AATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGT 142483
Query 63665 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63724
|| ||||| || | ||||||||||| || || || |||| | ||| | || | |||
Sbjct 142482 ACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTA 142423
Query 63725 CGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 63782
|||||||| || || |||| ||| |||||| || || || |||||||| |||
Sbjct 142422 GGTCTCAATGGCCTTTTCAATATTG--TTGCCATGAATGCCAACCGCAACACGCATCAAC 142365
Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842
| |||||| || | ||| ||| ||| || ||| || || |||||| || |
Sbjct 142364 AAGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGT 142305
Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902
|| || ||||| ||| ||||||| ||||| || || || | |||| | || ||||||
Sbjct 142304 GTCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGC 142245
Query 63903 TTATCCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTC 63962
| ||| || ||| | || || || || | ||||| || || | ||| |
Sbjct 142244 TCATCAGCATGTTTCATGACAATTTCATACGTCTCTTTCGAAATCATTGGCGCGGGTTGC 142185
Query 63963 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 64022
||||| || |||||||||| | | | ||| || || | || | || ||
Sbjct 142184 TTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCTTG 142125
Query 64023 GTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081
|||| |||||| || || || | |||||| | ||| |||| ||||||||||| || ||
Sbjct 142124 GTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGTG 142066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629810648388240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |