Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28]
883 sequences; 29,478,624 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq644 114 1e-20
>seq644
Length=110317
Score = 114 bits (126), Expect = 1e-20
Identities = 382/580 (66%), Gaps = 37/580 (6%)
Strand=Plus/Minus
Query 20946 TAAACGTGGGCGTCACCCAAGGTGTGCA-CAAAGTCTCCCGGGGTCAGGCCCGTGACGTG 21004
|| || || || ||||||| ||| || | || ||| || ||| |||| |||| | ||
Sbjct 42236 TACACATGCGCATCACCCATGGTATGAATCAGAGTG-CCGGGGTTCAGATCCGTCGCATG 42178
Query 21005 AGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCAT 21064
|| | | || |||||| || || || || ||||| || || || || || |||||
Sbjct 42177 GGCCAGTATATGCGTCAGCAGCGCATACGACGCAATGTTGAATGGCACACCAAGCCCCAT 42118
Query 21065 GTCGGCGGACCTCTGGTACAGCTGGCAGGACAG-CTCCCC------CCGAGCC------- 21110
||| || | || |||||| | || || || |||||| || ||||
Sbjct 42117 ATCGCACGAACGTTGATACAGCAGACACGATAGGCTCCCCTTGTTGCCCAGCCCATTCGG 42058
Query 21111 -------ACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGT 21162
|| || ||||| | |||| | ||||| || ||||| |||||| | || |
Sbjct 42057 ATATGAGACATAGAACTG-CGCAAACATATGACAGGGCGGGAGCGCCATCTTCTTCAGAT 41999
Query 21163 CCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGAT 21222
|||| ||||||||||| | ||| | |||||| || || |||| | | || | || |
Sbjct 41998 CCGCCGGGTTCCACGCACTCATGATGATGCGGCGGTCAAAGGGC-GTTTCTT--TCAGCT 41942
Query 21223 C---CACCACGTAACGC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCC 21278
||| || | ||| |||||||| || ||||| || ||| | | | ||| |
Sbjct 41941 TGCGCACAACCTC-CGCGAGCTGGTCGACGCCCTGGCCTGTGTAATCCGTCTTGGCGTCG 41883
Query 21279 CTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCG 21338
||||||| ||||| ||||| | |||||||||||| ||||| || || |||||||| |
Sbjct 41882 ATGTACTCGGCCCCGAAATGCCGCCACTGGAACCCATACACAGGGCCTAGATCGCCGACC 41823
Query 21339 CGGCGGTCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAAT 21397
||||| |||| ||||| | | ||| || ||||| |||| ||||||| ||
Sbjct 41822 TCGCGGTGCCCG-AGCCCAACTTTGTCCAGGAACTCGCGGCTGCCGTTACCGTCCCAGAT 41764
Query 21398 TTTTACGCC-GCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCA 21456
||| | ||| || | ||| || | ||||| |||| | || ||| ||||| || |
Sbjct 41763 TTTGATGCCTGCTTC-CGAGAGGGGGATGGAGGAGGTGCATCCGGAGATGAACCAGAGGA 41705
Query 21457 ACTCCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGT 21496
||| | | |||| | | | || || | |||||||||
Sbjct 41704 GCTCGGCGATGACGGCACGCAGGAAAACGCGTTTGGTGGT 41665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427771396461840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |