Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28] 883 sequences; 29,478,624 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq644 114 1e-20 >seq644 Length=110317 Score = 114 bits (126), Expect = 1e-20 Identities = 382/580 (66%), Gaps = 37/580 (6%) Strand=Plus/Minus Query 20946 TAAACGTGGGCGTCACCCAAGGTGTGCA-CAAAGTCTCCCGGGGTCAGGCCCGTGACGTG 21004 || || || || ||||||| ||| || | || ||| || ||| |||| |||| | || Sbjct 42236 TACACATGCGCATCACCCATGGTATGAATCAGAGTG-CCGGGGTTCAGATCCGTCGCATG 42178 Query 21005 AGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCAT 21064 || | | || |||||| || || || || ||||| || || || || || ||||| Sbjct 42177 GGCCAGTATATGCGTCAGCAGCGCATACGACGCAATGTTGAATGGCACACCAAGCCCCAT 42118 Query 21065 GTCGGCGGACCTCTGGTACAGCTGGCAGGACAG-CTCCCC------CCGAGCC------- 21110 ||| || | || |||||| | || || || |||||| || |||| Sbjct 42117 ATCGCACGAACGTTGATACAGCAGACACGATAGGCTCCCCTTGTTGCCCAGCCCATTCGG 42058 Query 21111 -------ACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGT 21162 || || ||||| | |||| | ||||| || ||||| |||||| | || | Sbjct 42057 ATATGAGACATAGAACTG-CGCAAACATATGACAGGGCGGGAGCGCCATCTTCTTCAGAT 41999 Query 21163 CCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGAT 21222 |||| ||||||||||| | ||| | |||||| || || |||| | | || | || | Sbjct 41998 CCGCCGGGTTCCACGCACTCATGATGATGCGGCGGTCAAAGGGC-GTTTCTT--TCAGCT 41942 Query 21223 C---CACCACGTAACGC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCC 21278 ||| || | ||| |||||||| || ||||| || ||| | | | ||| | Sbjct 41941 TGCGCACAACCTC-CGCGAGCTGGTCGACGCCCTGGCCTGTGTAATCCGTCTTGGCGTCG 41883 Query 21279 CTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCG 21338 ||||||| ||||| ||||| | |||||||||||| ||||| || || |||||||| | Sbjct 41882 ATGTACTCGGCCCCGAAATGCCGCCACTGGAACCCATACACAGGGCCTAGATCGCCGACC 41823 Query 21339 CGGCGGTCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAAT 21397 ||||| |||| ||||| | | ||| || ||||| |||| ||||||| || Sbjct 41822 TCGCGGTGCCCG-AGCCCAACTTTGTCCAGGAACTCGCGGCTGCCGTTACCGTCCCAGAT 41764 Query 21398 TTTTACGCC-GCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCA 21456 ||| | ||| || | ||| || | ||||| |||| | || ||| ||||| || | Sbjct 41763 TTTGATGCCTGCTTC-CGAGAGGGGGATGGAGGAGGTGCATCCGGAGATGAACCAGAGGA 41705 Query 21457 ACTCCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGT 21496 ||| | | |||| | | | || || | ||||||||| Sbjct 41704 GCTCGGCGATGACGGCACGCAGGAAAACGCGTTTGGTGGT 41665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427771396461840