Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28]
883 sequences; 29,478,624 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq35 226 4e-54
>seq35
Length=214891
Score = 226 bits (250), Expect = 4e-54
Identities = 593/899 (66%), Gaps = 12/899 (1%)
Strand=Plus/Minus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|| ||||| || || ||||||| | || ||||| ||| | || || | || | |
Sbjct 142958 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 142899
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980
|| || || | || ||||| ||||| || |||||||| |||| || || ||
Sbjct 142898 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 142839
Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040
||||| | || ||| ||||| || || ||||| |||||| |||||| | |
Sbjct 142838 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 142779
Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100
||||| | |||||| || || | ||| || || | | | || || || ||||| ||||||
Sbjct 142778 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 142719
Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160
|| || | || ||||| ||||| || | || | | ||| |||| |||||| || ||
Sbjct 142718 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 142659
Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220
| ||||| || || || ||| || ||||||| || || || ||
Sbjct 142658 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 142599
Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TATCATAGATGCCCTC 80279
|| || || || | || ||||| | || || || |||| | | || ||||| |||||
Sbjct 142598 ATACCGCCAGCTGTCTTCGAGATCATGGCACAA-GTCTTAAGGGTGTCGTAGATACCCTC 142540
Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGACTAGT 80336
|||||||| || |||| | | || || || |||| | ||| | | |||
Sbjct 142539 AATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGT 142483
Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 80396
|| ||||| || | ||||||||||| || || || |||| | ||||| || | |||
Sbjct 142482 ACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTA 142423
Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGCATTAAC 80454
|||||||| || ||| |||| ||| |||||| || ||||| |||||||| |||
Sbjct 142422 GGTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAAC 142365
Query 80455 ATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAA 80514
| |||||| || | ||| | | |||| ||| ||| || || ||| || || |
Sbjct 142364 AAGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGT 142305
Query 80515 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 80574
|| || ||||| ||| ||||||| ||||| || || || | |||| | ||||||||
Sbjct 142304 GTCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGC 142245
Query 80575 TTATCCTTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTC 80634
| ||| || ||| | || | || || | ||||| || || | ||| |
Sbjct 142244 TCATCAGCATGTTTCATGACAATTTCATACGTCTCTTTCGAAATCATTGGCGCGGGTTGC 142185
Query 80635 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 80694
||||| || |||||||||| | | | ||| || || | || | || ||
Sbjct 142184 TTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCTTG 142125
Query 80695 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753
|||| |||||| || || || |||||||| | ||| ||||| ||||||||||| || ||
Sbjct 142124 GTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGTG 142066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718260872108120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |