Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28] 883 sequences; 29,478,624 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq35 217 2e-51 >seq35 Length=214891 Score = 217 bits (240), Expect = 2e-51 Identities = 591/899 (66%), Gaps = 12/899 (1%) Strand=Plus/Minus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 || ||||| || || || ||| | || ||||| |||||| || || | || | | Sbjct 142958 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 142899 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063 || || || | | ||||| ||||| || |||||||| |||| || || || Sbjct 142898 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 142839 Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123 ||||| | || ||| ||||| || || ||||| |||||| |||||| | | Sbjct 142838 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 142779 Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183 ||||| | |||||| || || | ||| || || | | | || || || ||||| |||||| Sbjct 142778 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 142719 Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243 || || | || ||||| ||||| || | || | | ||| |||| |||||| || || Sbjct 142718 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 142659 Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCT 72303 | ||||| || || || ||| || ||||||| || | || || || Sbjct 142658 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 142599 Query 72304 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TATCATAGATGCCCTC 72362 || || || || | || ||||| | || || || |||| | | || ||||| ||||| Sbjct 142598 ATACCGCCAGCTGTCTTCGAGATCATGGCACAA-GTCTTAAGGGTGTCGTAGATACCCTC 142540 Query 72363 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGACTAGT 72419 || ||||| ||| |||| | | || || || |||| | ||| | | ||| Sbjct 142539 AATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGT 142483 Query 72420 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 72479 || ||||| || | ||||||||||| || || || |||| | ||||| || | ||| Sbjct 142482 ACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTA 142423 Query 72480 CGTCTCAATAGCTGATTCTATATCCCATTG--ATGTATTCCTACCGCGACACGCATTAAC 72537 |||||||| || ||| |||| ||| ||| || || ||||| |||||||| ||| Sbjct 142422 GGTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAAC 142365 Query 72538 ATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAA 72597 | ||||| || | ||| | | |||| ||| ||| || || |||||| || | Sbjct 142364 AAGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGT 142305 Query 72598 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGT 72657 || || ||||| ||| ||||||| ||||| || || || | |||| | || ||||| Sbjct 142304 GTCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGC 142245 Query 72658 TTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTC 72717 | ||| || ||| | || || || || | ||||| || || | ||| | Sbjct 142244 TCATCAGCATGTTTCATGACAATTTCATACGTCTCTTTCGAAATCATTGGCGCGGGTTGC 142185 Query 72718 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 72777 ||||| || |||||||||| | | | ||| || || | || | || || Sbjct 142184 TTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCTTG 142125 Query 72778 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836 |||| |||||| || || || |||||||| | ||| |||| ||||||||||| || || Sbjct 142124 GTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGTG 142066 Score = 105 bits (116), Expect = 9e-18 Identities = 346/530 (65%), Gaps = 11/530 (2%) Strand=Plus/Minus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 |||||||| ||||||| ||| || || | ||||| || |||||||| || || || | | Sbjct 144164 GTAAACTGGATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATTCCAGTCTTCAAA 144105 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTAT 70919 || | |||| || ||| |||||||| || || ||| |||| |||| || | Sbjct 144104 CCCATTTTCCACCCAGCAAAGTGCATACTGGTGAGCTTGCCCATAG-TAGGCTCCTTCAG 144046 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 |||||| || | || ||| || || ||||| || || | ||| || ||||| | | Sbjct 144045 GTGAATGTTGAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATCTGCAG 143986 Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 71039 ||| || ||| | |||||||| | || || || | ||| || || | |||| Sbjct 143985 GATGGTACGTTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTGATGTCGGCGGGAAT 143926 Query 71040 GTTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096 ||| | | || |||| ||| ||||||||||| || || | ||||| || | || Sbjct 143925 GTTGGGAATGTTTTGAACGGAGCCACCATCTGCGATGATACGGTTTTTCATGTTGTCCGA 143866 Query 71097 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCC 71156 ||| | ||| | | | | || || ||| ||||| || || || || || Sbjct 143865 CCACAGACCAAGGTCGACAAGATCCTTGAGAAGCCAAGGGTTAACGACCTGGAACTCACC 143806 Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216 || | || | |||| ||| || || ||| || || || | | || || || Sbjct 143805 AGCAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCAAAACATTCGTTGAAGCC 143746 Query 71217 CAAAATTTGAGCAGTTG-ATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGAC 71275 || ||| || || | || ||| || ||||| ||||||||||| | ||| || | || || Sbjct 143745 CAGAATCTG-GCTGGTGCTTGCGGTGGGCATCGGTGCCACCAACAAACTGTTACGAACAC 143687 Query 71276 CATGTGATCGG--ATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCG 71323 | ||| | || || || | || ||||| ||||| | ||| || |||| Sbjct 143686 C--GTGCTGGGCAATCTTCGCCTTCAGAGAATCCCAGTCCCAGAGGTCCG 143639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671131792301080