Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28]
883 sequences; 29,478,624 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq379 143 6e-29
>seq379
Length=11336
Score = 143 bits (158), Expect = 6e-29
Identities = 161/213 (76%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | ||| ||||| || || ||||| || ||||| | || | || |||
Sbjct 2601 AGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCAGACAAGGTACGGCCATCT 2542
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| ||||| ||||||||||| || || | ||||||||||||||| || || || ||||||
Sbjct 2541 TCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGAGGGATACCCTCCTTATCC 2482
Query 104468 TGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|| ||| ||||| || ||||| || | ||| || || ||||| |||| ||| |||||
Sbjct 2481 TGGATC-TTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCTACTTCTAATGTGATAGT 2423
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || || || || || || || |||||
Sbjct 2422 CTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 2390
Score = 122 bits (134), Expect = 2e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|||||||| ||||| || ||||| || || ||||| | || || || || || || |||
Sbjct 2050 GTAGATTCCTTCTGGATGTTATAATCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCA 1991
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| | | ||| || |||||||| || || || |||||||||||||| | ||
Sbjct 1990 GCGAAAATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTATCCTGAATCTTCGACTTG 1931
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || ||||| | || ||||| | || || ||||| || || || ||
Sbjct 1930 ACATTGTCAATAGTGTCGCTGGACTCGACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTC 1871
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 1870 TTGACGAAAATCTGCAT 1854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151385373726164
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |