Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28] 883 sequences; 29,478,624 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq35 208 1e-48 >seq35 Length=214891 Score = 208 bits (230), Expect = 1e-48 Identities = 589/899 (66%), Gaps = 12/899 (1%) Strand=Plus/Minus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 || ||||| || || |||||| ||| ||||| ||||| || || | || | | Sbjct 142958 TCAAACTCATCACCATAAACATCTGCCAAACCAGGGGCTTCATTGGGGCAGAACAGAGTC 142899 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || || |||| || ||||| ||||| || |||||||| |||| || || || Sbjct 142898 CAGTCACCGTTGGACTCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAAC 142839 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 ||||| | || ||| |||||| || || ||||| |||||| |||||| | | Sbjct 142838 AGATCACGGGCTCTGACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAG 142779 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 ||||| | |||||| || || | ||| || || | | | ||||| || ||||| |||||| Sbjct 142778 ATATCGGCATGCCAAGGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCC 142719 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | || ||||| ||||| || | || | | ||| |||| |||||| || || Sbjct 142718 TGGTCGACATACCTAGCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGAG 142659 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63352 | ||||| || || || ||| || ||||||| || || || || Sbjct 142658 GACCCATTAGTGCCACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCG 142599 Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TATCATAGATGCCCTC 63411 || || || || | || ||||| | || || || |||| | | || ||||| ||||| Sbjct 142598 ATACCGCCAGCTGTCTTCGAGATCATGGCACAA-GTCTTAAGGGTGTCGTAGATACCCTC 142540 Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGACTAGT 63468 || ||||| ||| |||| | | || || || |||| | ||| | | ||| Sbjct 142539 AATGCTATCCTCCTTCATATCGACGAGGAAGCA---AGACGCAAGCTGGGGTTGGGGAGT 142483 Query 63469 TCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTA 63528 || ||||| || | ||||||||||| ||||| || |||| | ||| | || | ||| Sbjct 142482 ACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTA 142423 Query 63529 CGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 63586 |||||||| || || |||| ||| |||||| || || || |||||||| ||| Sbjct 142422 GGTCTCAATGGCCTTTTCAATAT--TGTTGCCATGAATGCCAACCGCAACACGCATCAAC 142365 Query 63587 ATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63646 | |||||| || | ||| | | |||| || ||| || || |||||| || | Sbjct 142364 AAGTGCTGCGGACGCTCAGCAACCTTGCCATTGATTCGCAGCAGGTAGGACCGCTCGAGT 142305 Query 63647 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 63706 || || ||||| ||| ||||||| ||||| || || || | |||| | |||||||| Sbjct 142304 GTCTTGAAACCGAAAAAGTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTTGAGC 142245 Query 63707 TTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAATGTTTC 63766 | ||| || ||| | || | || || | ||||| || || ||| | Sbjct 142244 TCATCAGCATGTTTCATGACAATTTCATACGTCTCTTTCGAAATCATTGGCGCGGGTTGC 142185 Query 63767 CCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 63826 ||||| || || ||||||| | | | ||| || || | || | || || Sbjct 142184 TTGTTTTTGGGGTTAACATAGTGGTACAGGTCCGAGATGACCAGAGAGAACTGCTTCTTG 142125 Query 63827 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885 |||| ||||| || || || |||||||| | || |||| ||||||||||| || || Sbjct 142124 GTTTGCTTGTGGAGGTTGGACACGGCTATACGGGCAGCTAAGATGGCATAATCGGGGTG 142066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633625006286800