Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F002234955.1_202017-07-28] 883 sequences; 29,478,624 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq379 113 4e-20 seq135 91.5 1e-13 >seq379 Length=11336 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || |||||||| ||||||||| | || | |||||| | || ||||||||| || Sbjct 2808 TCCTTTTGAATATTGTAATCGGAGAGGGTCCTCCCATCTTCCAACTGCTTACCAGCGAAG 2749 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 ||||||||||| ||||| ||||| ||||| || ||||| ||||| || | | Sbjct 2748 ATGAGACGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGCTCTTCACGTTG 2689 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 |||| ||||||| ||| || || |||| ||| | || || ||||| ||||| || || Sbjct 2688 TCAATCGTGTCGGAGGACTCCACCTCCAGGGTAATGGTCTTTCCGGTGAGAGTCTTGACG 2629 Query 114372 AAAATCTGCATG 114383 || ||||||||| Sbjct 2628 AAGATCTGCATG 2617 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| | || | |||||||| || || ||||| |||||| Sbjct 2083 ATGCCACCACGAAGACGGAGAACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCG 2024 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||| || || || || |||||| | || | ||||| ||||| ||| Sbjct 2023 GAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAAATCAAGCGCTGCTGGTCAGGA 1964 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || || || |||||| || | | |||| |||||| |||| ||| Sbjct 1963 GGGATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCAATAGTGTCGCTGGACTCG 1904 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || ||||| || ||||| || || ||||||||||| Sbjct 1903 ACCTCCAAGGTGATGGTCTTGCCCGTGAGAGTCTTGACGAAAATCTGCAT 1854 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || | ||| | || ||||| ||||| || |||||||| Sbjct 2619 ATGCCACCACGCAGACGGAGGACCAGATGCAGTGTGGATTCCTTTTGGATATTGTAATCA 2560 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| |||||||||||| || ||||| |||||||||||||||| || ||| Sbjct 2559 GACAAGGTACGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGTTGATCAGGA 2500 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || || || ||||| || | | || | |||||| | || || Sbjct 2499 GGGATACCCTCCTTATCCTGGATCTTGCTCTTGACATTGTCGATGGTGTCTGAAGACTCT 2440 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || ||||| || || || || ||||| Sbjct 2439 ACTTCTAATGTGATAGTCTTTCCCGTGAGAGTCTTAACGAAGATTTGCAT 2390 >seq135 Length=180033 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 || ||||||||||| ||||||| || || ||| ||||| || ||||||||| |||| Sbjct 120695 TTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 120636 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 || ||||| ||||| || || || || || ||||| ||||| || | | || Sbjct 120635 AGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 120576 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 | ||||||| | || || ||||| | ||| | || || || ||||| || || || ||| Sbjct 120575 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 120516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420129878697396